Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_03474
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Entry
ECOPMV1_03474 CDS
T02847
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ecoi
Escherichia coli O18:K1 PMV-1 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
ecoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecoi03016
]
ECOPMV1_03474 (truB)
Enzymes [BR:
ecoi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ECOPMV1_03474 (truB)
Transfer RNA biogenesis [BR:
ecoi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ECOPMV1_03474 (truB)
Prokaryotic type
ECOPMV1_03474 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CDH66826
LinkDB
All DBs
Position
complement(3573902..3574846)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacattaacggcgttttgttgctggataaaccg
caggggatgtccagcaacgatgcgctgcaaaaagtgaaacggatttataacgccaaccgt
gccgggcataccggtgcgctggacccgctggcgaccggcatgttgccaatttgcctcggg
gaagcgacgaagttttcccagtatctgctggactccgacaaacgctatcgggtcattgcg
cgtcttggacagcgtaccgatacttctgatgccgacggacaaatcgttgaagaacgtccg
gtaacctttagtgcagagcaactggcggcggcgctggataccttccgtggcgatatcgaa
cagatcccttcgatgtattcagcactgaaatatcagggcaaaaaactgtacgaatacgcg
cgtcagggcattgaagttccgcgtgaagcgcgcccgattaccgtttatgaattgctgttt
attcgccatgaaggcaatgagctggagctggaaattcactgctcaaaaggcacttatatc
cgcactatcattgacgatctcggcgaaaaactcggttgtggcgcgcatgttatttacttg
cgtcgtctggcggtaagtaaatatccggttgaacggatggtgaccctggaacatctgcgt
gaactggttgagcaagccgaacagcaggatattccggctgcggagttacttgatccatta
ctgatgccaatggacagtccagcttcggactacccagtggtgaatcttccgttaacgtct
tctgtttacttcaaaaatggtaacccagttcgtacatccggtgcgccgctggaaggactg
gttcgcgttacagagggtgagaacggcaagtttatcggtatgggcgaaattgacgatgaa
ggccgcgttgcgcctcgtcgcctggtggttgaatacccggcgtaa
DBGET
integrated database retrieval system
