Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_03904
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Entry
ECOPMV1_03904 CDS
T02847
Symbol
xylF
Name
(GenBank) D-xylose-binding periplasmic protein precursor
KO
K10543
D-xylose transport system substrate-binding protein
Organism
ecoi
Escherichia coli O18:K1 PMV-1 (ExPEC)
Pathway
ecoi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecoi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ECOPMV1_03904 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoi02000
]
ECOPMV1_03904 (xylF)
Transporters [BR:
ecoi02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
ECOPMV1_03904 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Phage_sheath_1C
Motif
Other DBs
NCBI-ProteinID:
CDH67235
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All DBs
Position
3998946..3999938
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AA seq
330 aa
AA seq
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MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV
QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD
IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK
IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA
ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV
PSRLLTPIDVNKNNIKDTVVKDGFHKESEL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaagaacattctactcaccctttgcacctcacttctgcttaccaacgttgcg
gcacacgccaaagaagtcaaaataggtatggcgattgatgatctccgtcttgaacgctgg
caaaaagatcgagatatttttgtgaaaaaagcagaatctctcggcgcgaaagtatttgta
cagtctgcaaatggcaatgaagaaacacaaatgtcgcagattgaaaacatgattaaccgg
ggtgtcgatgttcttgtcattattccttataacggtcaggtattaagtaacgttgtaaaa
gaagccaaacaagaaggtattaaagtattagcttacgaccgtatgattaacgatgcggat
atcgatttttatatttctttcgataatgaaaaagtcggtgaactgcaggcaaaagccctg
gtcgatattgttccgcaaggtaattacttcctgatgggcggctcgccggtagataacaac
gccaagctgttccgcgccgggcaaatgaaagtattaaaaccttatgttgattccggaaaa
attaaagtcgttggtgaccaatgggttgatggctggttaccggaaaacgcattgaaaatt
atggaaaacgcgctaaccgccaataataacaaaattgatgctgtagttgcctcaaacgat
gccaccgcaggaggggcaattcaggcattaagcgcgcaaggtttatcagggaaagtagca
atttccggccaggatgcggatcttgcaggtattaaacgtattgctgccggtacgcaaact
atgacggtgtataaacctattacattgttggcaaatactgccgcagaaattgccgttgag
ttgggcaatggtcaggagccaaaagcggataccacactgaataatggcctgaaagatgtt
ccctcccgcctgctgacaccgatcgatgtgaataaaaacaacatcaaagatacggtagtt
aaagacggattccacaaagagagcgagctgtaa
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