Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_04625
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Entry
ECOPMV1_04625 CDS
T02847
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ecoi
Escherichia coli O18:K1 PMV-1 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
ecoi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ECOPMV1_04625 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecoi03019
]
ECOPMV1_04625 (orn)
03009 Ribosome biogenesis [BR:
ecoi03009
]
ECOPMV1_04625 (orn)
Messenger RNA biogenesis [BR:
ecoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ECOPMV1_04625 (orn)
Ribosome biogenesis [BR:
ecoi03009
]
Eukaryotic type
Pre-60S particles
RNases
ECOPMV1_04625 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CDH67914
LinkDB
All DBs
Position
4736323..4736868
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AA seq
181 aa
AA seq
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MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD
WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaatgaaaacaacctgatttggatcgatcttgagatgaccggtctggatccc
gagcgcgatcgcattattgagattgccacgctggtgaccgatgccaacctgaatattctg
gcagaagggccgaccattgcagtacatcagtccgatgaacagctggcgctgatggatgac
tggaacgtgcgcacccataccgccagcgggctggtagagcgtgtgaaagcgagcacgatg
ggcgatcgtgaagctgaactggcaacgctcgaattcttaaaacagtgggtgcctgcggga
aaatcgccgatttgtggtaacagcatcggtcaggaccgtcgcttcctgtttaaatacatg
ccggagctggaagcctacttccactaccgctatctcgatgttagcaccctgaaagagctg
gcgcgccgctggaagccggaaattcttgacggctttaccaagcaggggacgcatcaggcg
atggatgatatccgtgaatcggtggcggagttggcttactaccgcgagcattttatcaag
ctgtaa
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