Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_04710
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Entry
ECOPMV1_04710 CDS
T02847
Symbol
treR
Name
(GenBank) Trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
ecoi
Escherichia coli O18:K1 PMV-1 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
ecoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoi03000
]
ECOPMV1_04710 (treR)
Transcription factors [BR:
ecoi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ECOPMV1_04710 (treR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_3
HTH_31
HTH_IclR
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_28
HTH_Crp_2
HTH_26
CENP-B_N
MarR
TrmB
HHH
Peripla_BP_4
HTH_AraC
HTH_17
HTH_38
Motif
Other DBs
NCBI-ProteinID:
CDH67995
LinkDB
All DBs
Position
complement(4818275..4819222)
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNID
GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISY
LGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT
DTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVT
GRSEPQQIIIPATLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggctgaccatcaaagacatcgcgcgcttaagcggcgtggggaaatctacg
gtttcccgggtgctgaataacgaaagcggcgtgagccagcgcacgcgcgagcgtgttgaa
gcagtgatgaatcagcatggattttccccttcccgctctgcgcgcgctatgcgtgggcaa
agcgataaagtggtcgccatcattgttacccgtctggattcgttgtcagaaaatctcgcc
gttcaaaccatgctgccagcgttctatgaacaaggttacgatccaatcatgatggaaagt
cagttttccccacaattagttgccgaacatttgggggtcctgaaacggcgtaatatcgac
ggcgtagtgctgttcggttttaccggcataacagaagaaatgttagcccactggcagtca
tcgctggttctgctggcgcgtgacgcaaaaggctttgcttcggtctgttatgacgacgaa
ggggcaatcaagatcctgatgcaacggctgtatgaccaggggcatcgtaatatcagttat
ctcggcgtgccgcatagtgacgtgacgaccggtaagcgacgtcacgaagcctacctggcg
ttctgcaaagcgcataaattgcatcccgttgccgctctgccagggcttgctatgaagcaa
ggctatgagaacgtagcaaaagtgattacgcctgaaactaccgcgttactgtgcgcaacc
gacacgctggcacttggcgcaagtaaatacctgcaagagcaacgcatcgacaccttgcaa
ctggcgagcgtcggtaatacaccgttaatgaaattcctccatccggagatcgtcaccgta
gatcccggttacgccgaagctggacgccaggcggcctgccagttgatcgcgcaggtcacc
gggcgcagcgaaccgcaacaaatcatcatccccgccaccctgtcctga
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