Escherichia coli JJ1886: P423_00295
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Entry
P423_00295 CDS
T02896
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ecoj
Escherichia coli JJ1886
Brite
KEGG Orthology (KO) [BR:
ecoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecoj03021
]
P423_00295
Transcription machinery [BR:
ecoj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
P423_00295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGY83104
LinkDB
All DBs
Position
complement(65110..68016)
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT
ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE
QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD
NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDET
EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM
NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR
ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaattgggacttgga
accgttgtcgcggtggatgcgcgaactgtcactttacttttcccatctactggtgaaaac
cgtctgtacgcacgcagtgattcccccgtgacccgcgtgatgttcaaccctggtgatacc
attaccagccatgacggctggcagatgcaagtcgaagaagtaaaagaagaaaatggcttg
ctgacctatatcggtactcgccttgatactgaagagtccggcgtggccctgcgtgaagtt
ttccttgatagcaaactggtgttcagcaaaccgcaggaccgtctgtttgccgggcagatt
gaccgtatggaccgctttgcgctgcgttatcgcgcgcgtaagtattccagcgaacagttc
cgtatgccgtacagcggcctgcgcggtcagcgtaccagcctgatcccgcaccagctcaac
atcgctcatgatgttggtcgccgccacgcgccgcgcgtcctgttggctgacgaagtgggt
ttagggaaaaccattgaggccgggatgatcctgcatcagcaactgctctctggcgctgct
gaacgtgtgctgattatcgtcccggaaaccttacagcatcagtggctggtagaaatgctg
cgccgtttcaacctgcgctttgctctgtttgatgatgagcgttatgccgaagctcagcac
gatgcttacaacccgttcgataccgagcagctggtgatttgctcgctggattttgcccgt
cgtagcaaacagcgtctggaacatctctgtgaagccgagtgggatctactggtggtcgat
gaagcgcatcacctggtgtggagcgaagatgcgccgagccgtgaatatcaggccattgaa
caactggcagagcacgtgccgggcgttctgctgctgaccgcaaccccggaacagctgggg
atggaaagccacttcgcccgtctgcgtctgctggacccgaaccgtttccacgattttgcg
caattcgttgaagagcagaaaaattatcgtccggttgcggacgccgttgccatgctgctg
gcgggtaacaaactcagcaatgacgaactgaacatgctcggtgagatgatcggcgagcag
gatatcgagccgctgttgcaagcagcaaacagcgacagcgaagatgcccagagcgcccgt
caggaactggtttcgatgctgatggatcgccacggtaccagccgcgtgctgttccgtaac
acccgtaacggtgtgaaaggcttcccgaaacgcgagctgcatactattaagctgccactg
ccgacgcagtatcagaccgctattaaagtctccggcattatgggcgcacgcaaaagtgcg
gaagatcgcgctcgcgatatgctctatccggagcgtatttatcaggaatttgaaggcgat
aacgccacctggtggaacttcgatccgcgcgttgaatggctgatgggctacctgaccagt
catcgctctcagaaagtgctggtgatctgcgccaaagcggccactgcgctgcaactggag
caggtactgcgcgaacgtgaaggtattcgcgccgcagtgttccacgaaggcatgtcgatt
atcgaacgtgaccgcgctgccgcctggtttgctgaagaagacaccggtgcgcaggtactg
ctgtgctcggaaatcggttctgaaggacgtaacttccagttcgccagccacatggtgatg
tttgacctgccattcaacccggatctgctggagcagcgtattgggcgtctggatcgtatc
ggtcaggcgcacgatattcagatccatgtgccttatctggaaaaaacggctcagtcggtg
ctggtgcgctggtatcacgaaggtctggatgcgttcgagcacacctgcccgaccggacgc
actatttacgatagcgtatacaacgatctgattaactatctggcttcaccggatgagacc
gaaggctttgacgatctaatcaaaaactgccgcgagcagcacgaagcgctgaaagcacaa
ctggaacaggggcgtgaccgcctgctggagatccattccaacggtggcgaaaaagcccag
gcactggcagaaagcattgaagagcaggatgacgataccaatctgatcgccttcgccatg
aacctgttcgatattatcggtatcaatcaggacgatcgcggcgacaacatgatcgtgctg
acgccgtccgatcatatgctggtgccggacttccctggcctgtcggaagatggcatcacc
atcaccttcgaccgtgaagtggcgctggcgcgtgaagatgcacagtttattacctgggag
catccgctgatccgcaacggtctggatctgatcctttctggcgataccggtagcagcacg
atttcactgttgaaaaacaaagcgttgccggtaggtacgctgttggtggaactgatttat
gtggttgaagcccaggctccgaagcagttgcagctcaaccgcttcctgccaccgacgccg
gtacgtatgctgctggataaaaacggcaacaacctggcggcgcaggtagaatttgaaacc
tttaaccgtcagcttaacgcggttaaccgtcacaccggcagcaagctggttaacgcggtg
cagcaggatgttcacgctatccttcagctgggggaagcgcagatcgagaaatctgcccgt
gcattgattgatgcagcgcgtaacgaagccgacgaaaaactgtctgccgagctgtctcgt
ctggaagcgctgcgtgcagttaacccgaacattcgtgacgacgaactgaccgccattgag
agcaaccgtcagcaggtaatggaaagcctggatcaggcaggctggcgtctggatgccctg
cgtttgatcgttgtgacgcatcagtaa
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