Escherichia coli JJ1886: P423_00785
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Entry
P423_00785 CDS
T02896
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ecoj
Escherichia coli JJ1886
Brite
KEGG Orthology (KO) [BR:
ecoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecoj03016
]
P423_00785
Enzymes [BR:
ecoj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
P423_00785
Transfer RNA biogenesis [BR:
ecoj03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
P423_00785
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AGY83184
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All DBs
Position
complement(174731..175261)
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AA seq
176 aa
AA seq
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MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL
SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR
PFHPHITLLRDASEAVTIPPPGFNWSYTVTEFTLYASSFARGRTRYTPLKRWALTQ
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccgcaacggctgttctttgctatcgacttacctgcagaaatccgcgaacag
attatccactggcgcgccacacacttcccacctgaggcgggacgtccggtcgccgccgat
aatttgcatctgactctggcatttttaggcgaagtgagcgcagagaaagagaaggcgctt
tctcttttagccggacggattcgtcaacctggtttcacactcacgcttgatgacgccggt
caatggctgcgttcgcgtgtggtgtggttagggatgcgacagccgccacgcggcttaatc
cagctggcgaatatgctccgttcacaggctgcccgcagcggttgttttcaaagcaatcgt
ccgtttcatccacatattaccttattgcgcgacgccagcgaggcggtgacaatcccgccg
ccaggttttaactggtcgtatacggtgacggagttcaccctttacgcctcctcgtttgcc
cgtggacgcacacgctacacgccgctaaaacgctgggcgctaacgcaataa
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