Escherichia coli JJ1886: P423_01405
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Entry
P423_01405 CDS
T02896
Name
(GenBank) RNA polymerase sigma 70
KO
K02405
RNA polymerase sigma factor FliA
Organism
ecoj
Escherichia coli JJ1886
Pathway
ecoj02020
Two-component system
ecoj02026
Biofilm formation - Escherichia coli
ecoj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ecoj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P423_01405
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
P423_01405
09142 Cell motility
02040 Flagellar assembly
P423_01405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecoj03021
]
P423_01405
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ecoj02035
]
P423_01405
Transcription machinery [BR:
ecoj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P423_01405
Bacterial motility proteins [BR:
ecoj02035
]
Flagellar system
Flagellar assembly proteins
Stator
P423_01405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
GerE
Motif
Other DBs
NCBI-ProteinID:
AGY87088
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All DBs
Position
300944..301660
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AA seq
238 aa
AA seq
DB search
MLQDVFESEEFAATLVLTPQQESHYLQAYLPLVRKVVRQLAPQCNCIIDRQDMEQTALMG
LLNAIRRYGLPDEGFAGYAVHRIRGAILDELRALDWRPRQLRQKYHQMKDLIRETRKKLG
HEPEWQELAEEGISHEDYLEYQQLEGAETLASLDELLNGEGPGIPLAGRELEDQFVTQQM
LQHALSQLSEKEQLILSMYYQHEMNLKEIALVLGLTEARICQLNKQIAQKIRDFVYPN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgctacaggatgtattcgagtcagaagaatttgcagccacgctggtattaactccgcag
caggagagccactacttgcaggcctatttaccgttggtgcgtaaagtggtgcggcaactt
gccccgcagtgtaattgcattattgaccgtcaggatatggaacaaacggcgttaatgggg
ctgttgaacgccattcgtcgctatgggctgccggacgaaggttttgcgggctatgccgtg
caccgtattcgcggtgcgatcctggatgagctgcgcgctctcgactggcgaccgcgccag
ctgcgacagaaatatcatcagatgaaagacctgattcgcgaaacgcgtaaaaaactgggg
cacgaaccggagtggcaggagctggctgaggaagggatctcgcatgaagattatctcgaa
tatcagcaactggaaggggcggaaacgctcgccagcctggacgaactgctgaacggcgaa
gggccaggcattccgcttgctggccgggaactggaagatcagtttgtcactcagcaaatg
ttgcaacacgcgctttcacaattaagcgaaaaagagcaactgatcctctccatgtattac
cagcatgagatgaatctcaaagagattgcgctggtattagggctaaccgaggcccgaatt
tgtcaactgaataaacagatcgcgcagaaaattcgtgattttgtctatccgaattaa
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