Escherichia coli JJ1886: P423_02020
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Entry
P423_02020 CDS
T02896
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ecoj
Escherichia coli JJ1886
Brite
KEGG Orthology (KO) [BR:
ecoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecoj03400
]
P423_02020
DNA repair and recombination proteins [BR:
ecoj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P423_02020
Archaeal homologous recombinant proteins
P423_02020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
RsgA_GTPase
cobW
nSTAND3
AAA_21
NTPase_1
AAA_22
AAA_14
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AGY83361
LinkDB
All DBs
Position
complement(439508..442651)
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSNVSQSQNDLMTRDTAECLAEVEFEVKDEAYRAFWSQNRARNQPDGNLQVPRVELARCA
DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLITAQQ
QEQQSLNWLTRLDELQQEASRRQQALQQALAEEEQAQPQLAALSLAQPARNLRPHWERIA
EHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRFRQ
WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVASAQAQHAE
QRPLRQRLVALHGQIVPQQKRLAQLQVAIQNVTLEQTQRNAALNKMRHRYKEKMQQLADV
KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQARLLTLEKEVK
KLGEEGATLRGQLDALTKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPQDDIQP
WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQE
DEEESWLATRQQEAQSWQQRQNELTALQNRMQQLTPILETLPQSDELPHSEETVALENWR
QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT
QLEQLKQNLENQRRQAQTLVTQTAETLTQHQQHRPGGLSLTVTVEQIQQELAQTHQKLRE
NTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQG
LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLESAFAVK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaacctgaactcattaaaaggcgaatggaagatt
gatttcacccgcgagccgttcgccagcaacgggctgtttgctattaccggcccaaccggt
gcggggaaaaccaccctgctggacgccatttgtctggcgctgtatcacgaaactccgcgc
ctctctaacgtttcacaatcgcaaaatgatctcatgacccgcgataccgccgaatgtctg
gcggaagtggagtttgaagtcaaagatgaagcgtatcgcgcgttctggagccagaatcgg
gcgcgtaaccagccggacggtaatttgcaggtgccacgcgtagagctggcgcgctgtgca
gacggcaaaattctcgccgacaaagtgaaagataagctggaactgacggcgacgttaacc
ggactggattacgggcgcttcacccgttcgatgctgctttcgcaggggcaatttgctgcc
ttcctgaatgccaaacccaaagaacgcgcagaattgctcgaggagttaaccggcactgaa
atctacgggcaaatctcggcgatggtttttgagcagcacaaatcggcccgcacagagctg
gagaagctgcaagcgcaggccagcggcgtcgcgttgctcacgccggaacaagtgcaatcg
ctgacagcgagtttgcaggtacttactgacgaagaaaaacagttaattaccgcgcagcag
caagaacaacaatcgctaaactggttaacgcgtctggacgaattgcagcaagaagccagc
cgccgtcaacaggccttgcaacaggcattagccgaagaagaacaagcgcaacctcaactg
gcggcgctcagtctggcacaaccggcacgaaatcttcgtccgcactgggaacgcatcgca
gaacacagcacggcgctggcgcatactcgccagcagattgaagaagtaaatactcgctta
cagagcacaatggcgcttcgtgcgagcattcgccaccacgcggcgaagcagtcagcagaa
ttacagcagcagcaacaaagcctgaatgcctggttacaggaacacgaccgcttccgtcag
tggaacaacgaactggcgggttggcgtgcgcagttctcccaacaaaccagcgatcgcgag
catctgcggcaatggcagcaacagttaacccatgctgagcaaaaacttaatgcgcttgcg
gcgatcacgttgacgttaaccgccgatgaagttgctagcgcccaggcgcaacatgctgag
caacgcccactgcgtcagcgcctggtcgcactgcatgggcagattgttccccaacaaaaa
cgtctggcgcagttacaggtcgctatccagaacgtcactctggagcagacgcaacgtaat
gccgcacttaacaaaatgcgccatcgttataaagaaaagatgcaacaacttgccgatgtg
aaaaccatttgcgagcaggaagcgcgcattaaaacgctggaagcccagcgcgcacagtta
caggcgggtcagccttgcccactttgtggttccaccagccacccggcggtcgaggcgtat
caggcgctggaaccgggcgttaatcaggcccggctattaacgctggaaaaagaagtgaaa
aagctcggcgaagaaggtgcgacgctacgtgggcaactggacgccttaacaaagcaactt
cagcgcgatgaaaacgaagcgcaaagcctccgacaagatgagcaagcacttactcaacaa
tggcaagccgtcacggccagcctcaatatcaccctgcagccacaggacgatattcaaccg
tggctggatgcacaagatgagcacgaacgccagctgcggttactcagccaacggcatgaa
ttacaagggcagattgccgcgcataatcagcaaattatccagtatcaacagcaaattgaa
caacgccagcagcagctcttaacggcattggcgggttatgcactgacattgccacaggaa
gatgaagaagagagctggttggcgacgcgtcagcaagaagcgcagagctggcagcaacgc
cagaacgaattaaccgcgctgcaaaaccgtatgcagcagctgacgccgattctggaaacg
ttgccgcaaagtgatgaactcccgcacagcgaagaaactgtggcgctggaaaactggcgg
caggttcatgaacaatgtctcgcattacacagccagcagcagacgttacagcaacaggat
gttctggcggcgcaaagtctgcaaaaagcccaggcgcagtttgacaccgcgctacaggcg
agcgtctttgacgatcagcaggcgttccttgcggcgctaatggatgaacaaacactaacg
cagctggaacagctcaagcagaatctggaaaaccagcgccgtcaggcgcaaacgctggtc
actcagacagcagaaacgctgacacagcatcagcaacaccgacctggcgggttgtctctc
actgtgacggtggagcagattcagcaagagttagcgcaaactcaccaaaagttgcgtgaa
aacaccacgagtcaaggcgagattcgccagcagctgaagcaggatgcagataaccgtcag
caacaacaaaccttaatgcagcaaattgctcaaatgacgcagcaggttgaggactgggga
tatctgaattcgctaataggttccaaagagggcgataaattccgcaaatttgcccaaggg
ctgacgctggataatttagtccatctcgctaatcagcaacttacccggctgcacgggcgc
tatctgttacagcgcaaagccagcgaggcgctggaagttgaggttgttgatacctggcag
gctgatgcggtacgcgatacccgtaccctttccggcggcgaaagtttcctcgtcagtctg
gcgctggcactggcgctttcagatctggtcagccataaaacgcgtattgactcgctgttc
cttgatgaaggttttggcacgctggatagcgaaacgctggataccgcccttgatgcgttg
gatgccctgaatgccagtggcaaaaccatcggggtgattagccacgttgaagcgatgaaa
gagcgtattccggtgcagatcaaagtgaagaagatcaatggactgggctacagcaaactg
gaaagtgcgtttgcagtgaaataa
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integrated database retrieval system
