Escherichia coli JJ1886: P423_05135
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Entry
P423_05135 CDS
T02896
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
ecoj
Escherichia coli JJ1886
Brite
KEGG Orthology (KO) [BR:
ecoj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecoj01002
]
P423_05135
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecoj01011
]
P423_05135
Peptidases and inhibitors [BR:
ecoj01002
]
Cysteine peptidases
Family C82
P423_05135
Peptidoglycan biosynthesis and degradation proteins [BR:
ecoj01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
P423_05135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
DUF4389
Motif
Other DBs
NCBI-ProteinID:
AGY83868
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Position
1062685..1064532
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AA seq
615 aa
AA seq
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MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAVSEQGEALPQAQATAIM
AGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQL
AEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGYLHFIANIPVKGTRWLYSSKP
YALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYAAMHESLLALLSDTKPWPQLTGK
ATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKLMD
KQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLA
LNIQRLRLLPTELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVV
VNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLP
FRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANM
LLQDAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPA
RSSSQIVSKAEQLIR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaatatgatgtgtggtcgtcggctgtcggcaatcagtttgtgcctggccgta
acattcgctccactgttcaatgcgcaggccgatgagcctgaagtaatccctggcgacagc
ccggtggctgtcagtgaacagggcgaggcactgccgcaggcgcaagccacggcaataatg
gcggggatccagccattgcctgaaggtgcggctgaaaaagcccgcacgcaaatcgaatct
caattacccgcaggttataagccggtttatcttaaccagcttcaattgttgtatgccgca
cgcgatatgcaacccatgtgggaaaaccgtgatgctgttaaagccttccagcaacagctg
gcagaggtggcgattgccggtttccagccgcagtttaataaatgggtagagttactgacc
gatcctggtgttaacgggatggcacgcgacgtggtgctctctgatgcgatgatgggctat
ctccatttcattgcaaatattccggtcaaaggcactcgctggctatatagcagtaaacct
tatgcgcttgcaacgccgccgctttcggtgattaaccaatggcagctggcgctggataaa
ggtcaattgccgacgtttgttgcaggactggcaccgcagcatccgcaatatgcggcgatg
catgaatcgttactggccttactcagtgacaccaaaccgtggcctcaactgaccggtaaa
gcaacgttgcgcccaggacagtggagtaacgacgtaccggcgttgcgcgaaatattgcaa
cgtacaggcatgttggacgggggaccgaaaattacgctacctggcgatgacacgccaact
gacgcggtagtcagcccatcggctgttactgttgaaacagcagaaactaagctgatggac
aaacaaactacgtctcgtagtaaacctgcgcctgccgttcgcgccgcctacgataatgaa
ctggtggaagccgttaaacgttttcaggcatggcaaggattgggagcagatggtgctatt
ggcccggcaacgcgtgactggttaaacgtaacgcccgcccagcgtgctggcgtgttggca
ctcaacatccagcgattgcgcttgctgccaacagagctttctaccgggatcatggttaac
attccagcctattcgctggtctactatcagaacggcaatcaggtgctggattcgcgagtc
attgtcggtcgccccgatcgcaaaacgccgatgatgagcagtgcacttaacaacgtagtg
gtaaacccgccgtggaacgtaccaccaactctggcacgcaaagatattctgccgaaagtg
cgcaacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagc
agagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccg
ttccgtttccagcaggctccaggcccacggaactcgctggggcgctataaattcaatatg
ccgagttcagaggccatttatttgcatgacacgccgaaccacaatctgttcaaacgtgat
acacgcgcattgagctcaggctgtgtacgagtgaataaagcttccgatctggcgaatatg
ctgttgcaggatgcaggatggaatgacaaacgtatttctgatgcgctgaagcagggcgat
acgcgttacgtcaatattcggcagtcgattccggtgaatctctactatctgacggccttt
gttggtgctgatggtcgtacccagtatcgtacagatatttacaattatgatctgcctgcg
cgatccagctcgcaaattgtatcgaaagcggaacaattaatcaggtaa
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