Escherichia coli JJ1886: P423_05615
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Entry
P423_05615 CDS
T02896
Name
(GenBank) transcriptional regulator
KO
K04333
LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
Organism
ecoj
Escherichia coli JJ1886
Pathway
ecoj02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecoj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
P423_05615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoj03000
]
P423_05615
Transcription factors [BR:
ecoj03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
P423_05615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
VpsT-like_REC
Sigma70_r4_2
HTH_24
HTH_40
HTH_23
Mcm-like_N
RNA_binding
DUF1799
Motif
Other DBs
NCBI-ProteinID:
AGY83958
LinkDB
All DBs
Position
complement(1162935..1163585)
Genome browser
AA seq
216 aa
AA seq
DB search
MFNEVHSIHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDM
MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYAMEDQERVVNG
LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL
FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaagtccatagtattcatggtcatacattattgttgatcactaaaccttct
ttgcaagcgacagctctcttgcagcaccttaaacaatcgctggcgattacaggaaaatta
cataatattcaacgttctctggacgatatatcttcaggctctattattcttctggatatg
atggaagcggataaaaagcttatccattattggcaggatactttgagcaggaaaaacaac
aatatcaaaatattgttgctaaatacgcctgaagattacccgtaccgcgacattgaaaac
tggcctcatatcaacggcgttttttatgccatggaggatcaagaacgtgttgtcaatggg
ttgcaaggcgtcctgcgcggcgaatgctactttacgcaaaagcttgccagttacctgatt
acgcattcaggtaactatcgttataacagcacggaatcagccctccttactcatcgggaa
aaagagatcctgaataagctgcgtatcggcgcgtctaataacgagatcgctcgttcgttg
ttcatcagcgaaaatacggttaaaacgcatctttataatcttttcaagaagatagccgta
aaaaaccggacacaagcggtttcctgggcaaacgataacctcaggcgataa
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