Escherichia coli JJ1886: P423_14580
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Entry
P423_14580 CDS
T02896
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehdyrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ecoj
Escherichia coli JJ1886
Pathway
ecoj00250
Alanine, aspartate and glutamate metabolism
ecoj00310
Lysine degradation
ecoj00350
Tyrosine metabolism
ecoj00650
Butanoate metabolism
ecoj00760
Nicotinate and nicotinamide metabolism
ecoj01100
Metabolic pathways
ecoj01120
Microbial metabolism in diverse environments
Module
ecoj_M00027
GABA (gamma-Aminobutyrate) shunt
ecoj_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ecoj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
P423_14580 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
P423_14580 (gabD)
00310 Lysine degradation
P423_14580 (gabD)
00350 Tyrosine metabolism
P423_14580 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
P423_14580 (gabD)
Enzymes [BR:
ecoj01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
P423_14580 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
P423_14580 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
P423_14580 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
AGY85399
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All DBs
Position
2979142..2980590
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AA seq
482 aa
AA seq
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MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAASRA
LPAWRALTAKERANILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDS
VYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
HERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIIGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaacgacagtaacttattccgccagcaggcgttgattaacggggaatggctg
gacgccaacaatggcgaggtcatcgacgtcaccaatccggcgaacggcgacaagctgggt
agcgtgccgaaaatgggcgctgatgaaacccgcgccgctatcgacgccgccagccgcgcc
ctgcccgcctggcgtgcgctcactgccaaagaacgcgccaacattctgcgcaactggttc
aatttaatgatggagcatcaggacgatttagcgcgcctgatgaccctcgaacagggcaaa
ccactggctgaagcgaaaggcgaaatcagctacgccgcctcatttattgagtggtttgct
gaagaaggcaaacgtatttatggcgacaccattcccggtcatcaggccgataaacgcctg
attgtgatcaagcagccgattggcgtcaccgcggctatcacgccatggaacttcccggcg
gcgatgattacccgtaaagctggtccggcgctggcggctggctgcaccatggtgctgaag
cccgccagtcagacgccgttctctgcgctggcgctggcagaactggcgattcgcgcgggc
gttccggctggcgtgtttaacgtggtcaccggttcggcgggcgcggtcggtaacgaactg
accagcaacccgctggtgcgcaagctgtcgtttaccggctcgaccgaaattggccgtcag
ttaatggaacagtgcgcgaaagacatcaaaaaagtgtcgctggagctgggcggcaacgca
ccgtttattgtctttgacgatgccgatctcgataaagccgtggaaggcgcgctggcctcg
aaattccgtaacgccgggcaaacctgcgtctgcgccaaccgcctgtatgtgcaggacagc
gtgtatgaccgctttgccgaaaaattgcagcaggcggtgagcaaactgcacatcggcgac
gggctggagaaaggcgtcaccatcgggccgttgatcgatgaaaaagcggtagcaaaagtg
gaagagcatattgctgatgcgctggagaaaggcgcgcgcgtggtttgcggcggtaaagca
catgaacgcggcggtaacttcttccagccgaccattctggtagacgttccggctaacgcc
aaagtgtcgaaagaagagacgtttggccccctcgccccgctgttccgttttaaagatgaa
gccgatgtgattgcgcaagccaatgacaccgaatttggacttgcagcctatttctacgcc
cgtgatttaagccgcgtcttccgcgtgggcgaagcactggagtacggcatcatcggcatc
aacaccggcattatttccaatgaagtggccccgttcggcggcattaaagcctcgggtctg
ggtcgtgaaggttcgaagtatggcatcgaagattacttagaaatcaaatatatgtgcatc
ggtctttaa
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