Escherichia coli JJ1886: P423_16775
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Entry
P423_16775 CDS
T02896
Name
(GenBank) Accessory colonization factor AcfD
KO
K10939
accessory colonization factor AcfD
Organism
ecoj
Escherichia coli JJ1886
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4092
Peptidase_M60
M60-like_N
Trypan_PARP
PQQ
Neisseria_TspB
Motif
Other DBs
NCBI-ProteinID:
AGY87642
LinkDB
All DBs
Position
complement(3438128..3442552)
Genome browser
AA seq
1474 aa
AA seq
DB search
MPEVKPDPTPNPEPTPEPTPDPEPTPEPTPDPEPEPEPEPVPTKTGYLTLGGSQRVTGAT
CNGESSDGFTFTPGEDVTCVAGNTTIATFDTQSEAARSLRAVEKVSFSLEDAQELAASDD
KKSNAVSLVTSSNSCPANTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENN
AATDKAPSTHTSPVVPVTTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSMGNG
VVGVNYYTSSGRGVTGENGKFNFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGA
NIDQLIHRYSQAGKNDEREVPDVVRKVFAEYPNVINEIINLSLSNGEALSEGDQTFERTN
EFLEQFESGQAKEIDTAICDSLGGCNSQRWFSLTARNVNEGQIQGVINKLWGVDKDYKSV
TKFHVFHDSTNFYGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAY
ITEAPSLVEPENVTRDTATFNLPFISLGQVGEGKLMVIGNPHYNSILRCPNGYSWEGGVD
KNGQCTRNSDSNDMKHFMQNVLRYLSDDKWTPDAKASMTVGTNLDTVYFKRHGQVTGNSA
EFGFHPDFAGISVEHLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYAIPLRADTSKPKLT
QQDVTDLIAYLNKGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGY
PNRVRQQRATGIWVYERYPAVDGALPYTIDSKTGEVKWKYQVENKPDDKPKLEVASWLED
VDGKQETRYAFIDEADHKTEDSLKAAKAKIFEKFPGLKECKDPTYHYEVNCLEYRPGTGV
PVTGGMYVPQYTQLSLNADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVDLE
RLYQNVSVWLWNKIEYRYENDKDDELGFKTFTEFLNCYANDAYTGGTQCSDELKKSLVDN
NMIYGEKSVNKAGMMNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSAEGEKV
TETISLYSNPTKWFAGNMQSTGLWAPAQKEVTIESSASVPVTVTVALADDLTGREKHEVA
LNRPPKVTKTYDLKANDKVTFKVPYGGLIYIKGNSPKNESAEFTFTGVVKAPFYKDGEWK
NALNSPAPLGELESDAFVYTTPKKNLEASNFTGGVAEFAKDLDTFASSMNDFYGRNDEDG
KHRMFTYKNLTGHKHRFTNDVQISIGDAHSGYPVMNSSFSTNSTTLPTTPLNDWLIWHEV
GHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQAWARGG
AGDRLLMYAQLKEWAEKNFDIKQWYPEGDLPEFYSDREGMKGWNLFQLMHRKARGDDVGK
TKFGERNYCAESNGNAADKLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMNFEGGV
SQSAYETLAALNLPKPQQGPETINQVTEHKMSAE
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
ttgccggaagtgaaacctgatccaacaccaaacccggagccgacgcctgagccaacgccg
gacccagaacctacgccggaaccgacacctgatcctgagccagaaccggagccagaacct
gttcctacgaaaacgggttatctgaccctgggcggaagccagcgggtaactggtgctact
tgtaatggtgaatccagcgatggctttacatttacacctggtgaggacgttacttgcgtg
gcgggtaacacgacaattgctaccttcgacacccagtcagaagctgcgcgtagcctgcgt
gcggttgaaaaagtgtcgtttagtcttgaggacgcgcaagaactggcagcttccgatgac
aagaaaagcaatgcggtttcgctggtaacgtccagtaacagctgtccggcgaatacagaa
caggtttgcctgacgttctcctcagtgatcgagagtaaacgtttcgactcgctgtataag
caaatcgatctggcaccggaagagttcaaaaagctggtcaatgaagaggtggaaaacaat
gccgcgaccgataaagcgccatccactcatacttcaccggttgtgcccgtcaccacgccg
ggaacaaaaccggatctgaacgcttccttcgtgtcggctaacgcggaacagttttatcag
tatcaacccactgaaatcattctctccgaaggccgactggtagatagcatgggcaatggt
gtggttggcgtaaattactacaccagctcaggccgtggcgtaactggcgaaaacggcaaa
ttcaacttcagctggggcgaaaccatctcctttggtatcgacacctttgaactgggctca
gtgcgcggcaataagtcgaccattgcgttgactgaactgggtgacgaagttcgcggcgcg
aatattgatcagcttattcatcgttactcccaggccggaaaaaatgatgagcgtgaagtg
ccggacgtagtgcgcaaggtctttgccgagtatcccaacgtaatcaacgagattatcaat
ctctcgttatccaatggcgaggcgttgagcgaaggcgatcaaacctttgagcggacaaac
gaatttcttgagcagtttgaatccgggcaggctaaagagattgatacggcgatttgtgac
tcccttgggggctgcaactctcagcgttggttctcgttgacagcacgcaatgttaacgaa
ggtcagattcagggcgttatcaacaagctgtggggtgtggataaagattacaaatcagtg
acgaaattccacgtcttccatgactctaccaacttctatggcagtaccggtaatgcgcgc
ggtcaggcagtggtgaatatctccaacgcggccttcccgattctgatggcgcgtaatgat
aaaaactactggctggcgtttggcgaaaaacgcgcctgggataaaaacgagctggcgtac
attacggaagcgccttctctcgttgagccggaaaacgttacgcgcgataccgccaccttt
aacctgccgtttatttcgctggggcaagtcggtgagggcaaactgatggttatcggtaac
ccgcactacaacagcattttgcgttgtccgaacggttacagctgggaaggcggtgttgat
aaaaacggtcagtgtacgcgtaacagtgattctaatgatatgaagcactttatgcagaac
gtgttgcgctatctgtccgacgataaatggacgccggacgcgaaagccagcatgaccgta
ggcaccaacctggatactgtctatttcaaacgtcatggtcaggttacaggaaacagcgct
gagttcggctttcatccggattttgcgggtatctctgttgagcatttaagtagctatggc
gatctcgacccgcaggaaatgccgctgctgatcctcaacggctttgagtatgtgactcag
gttggtaacgatccttatgcaatcccgctgcgagcagataccagcaaaccgaagctgact
cagcaggatgtgaccgatctgatcgcctatctgaacaaaggtggatcggtgctgatcatg
gaaaacgtgatgagcaatcttaaggaagagagcgcgtctggctttgtacgtctgcttgat
gccgcaggtctgtcgatggcactgaacaagtcggtagtaaataacgatccgcaagggtat
ccgaaccgcgttcgtcagcagcgcgcaacgggcatttgggtctatgaacgttatcctgcc
gtagatggtgcgctgccgtacaccatcgatagtaagacaggggaagttaagtggaaatat
caggtagaaaacaaacctgatgacaaaccgaagctggaagttgccagctggctggaagat
gtagatggcaaacaggaaacgcgttatgcctttattgatgaggccgatcataaaacagag
gattctctgaaggctgcgaaggcaaaaatctttgagaagtttcctggattaaaggagtgt
aaggacccaacttaccactacgaggtcaactgtctggaatatcgtcctggcacgggggtt
ccggttactggtggcatgtatgttccacagtatacgcaactaagccttaacgccgacacg
gcaaaagcgatggtgcaggctgcggatttaggcaccaacattcagcgtctgtatcagcat
gagctctacttccggaccaatggtcgcaaaggtgagcgtctgagcagcgtcgatctggaa
cgtctgtaccagaacgtgtcggtctggctgtggaataaaattgaatatcgctatgaaaac
gacaaggatgacgagctgggctttaaaacgttcaccgagttcctgaactgctacgccaac
gatgcctatactggcggcacgcagtgttctgatgagctgaaaaaatcgctggtcgataac
aacatgatctacggcgagaagagcgttaataaagcgggcatgatgaacccgagctatccg
ctcaactatatggaaaaaccgctgacgcgcctgatgctgggtcgttcctggtgggatctg
aacatcaaagttgatgtcgagaagtatccgggagcggtatcggcagaaggtgagaaggtt
actgaaaccatcagcctgtactccaatccgaccaaatggtttgcgggtaacatgcagtct
actggcctgtgggctccggctcagaaagaggtcaccattgagtcttctgcatcagttcct
gtgactgtcaccgtggcgctggccgacgatctgaccggacgcgagaagcatgaagtcgcg
ctgaaccgtccgccaaaagtgacgaaaacctatgatctgaaagccaatgataaggtgacc
ttcaaggtgccttacggtggtctgatttatatcaagggcaacagcccaaagaatgagtca
gccgaattcacctttactggtgtggtaaaagcgccgttctataaagacggcgaatggaaa
aacgctctgaactcccctgcgccgctgggcgagctggaatcagacgctttcgtttatacc
acgccgaagaagaaccttgaggccagcaatttcactggtggtgtagcagaattcgctaaa
gatctggatacctttgccagctcgatgaatgacttctacggtcgtaatgatgaagacggt
aagcaccggatgtttacctataaaaacttgacggggcacaagcatcgtttcaccaacgat
gtgcagatctccatcggtgatgcgcactcgggttatccggtaatgaacagcagcttctcg
acgaacagcaccacgctgccgacgacgccgctgaacgactggttgatctggcacgaagta
gggcacaacgccgccgaaacgccgctgactgttcctggcgcaactgaagtagcgaacaac
gttctggcgctgtacatgcaggatcgctatctcggcaagatgaaccgtgtcgctgacgat
attactgtcgcgccggaatatctggaggagagcaacggtcaggcatgggcgcgcggcggt
gcgggcgaccgtctgctgatgtacgcgcagctgaaggagtgggcagagaaaaactttgat
atcaaacagtggtatccagaaggtgacctgcctgagttctacagcgatcgtgaagggatg
aaaggctggaacctgttccagttgatgcaccgtaaagcacgcggcgatgatgttggcaaa
accaagtttggcgaaagaaattactgtgccgaatccaacggtaacgctgccgacaagctg
atgctgtgtgcctcctgggtcgctcagacggatctttcggagttctttaagaaatggaat
ccgggcgcgaatgcttaccagttaccgggagcgagcgagatgaacttcgagggcggtgtg
agccagtcggcttacgagacgctggcggcgcttaatctgccgaaaccgcagcaagggccg
gaaaccattaatcaggttaccgagcataagatgtcagctgagtaa
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integrated database retrieval system
