Escherichia coli JJ1886: P423_17785
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Entry
P423_17785 CDS
T02896
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ecoj
Escherichia coli JJ1886
Pathway
ecoj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecoj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P423_17785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecoj03019
]
P423_17785
03016 Transfer RNA biogenesis [BR:
ecoj03016
]
P423_17785
Enzymes [BR:
ecoj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
P423_17785
Messenger RNA biogenesis [BR:
ecoj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P423_17785
Transfer RNA biogenesis [BR:
ecoj03016
]
Prokaryotic type
tRNA degradation factors
P423_17785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
S1_RRP5
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AGY85881
LinkDB
All DBs
Position
complement(3651745..3653880)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNE
ALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDETLDENELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKNAIRRIEEITAEIEVGRVYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggccaacacaccgtgactctggaaacc
ggcatgatggctcgtcaggctactgccgctgttatggttagcatggatgacaccgcggta
tttgttaccgttgttggtcagaaaaaagccaaaccaggtcaggacttcttcccgctgacc
gttaactatcaggagcgtacctacgctgctggtcgtatcccgggtagcttcttccgtcgt
gaaggccgcccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccgattcgc
ccgctgttcccggaaggcttcgtcaacgaagttcaggttatcgccaccgtggtttctgtt
aacccgcaggttaacccggatatcgtcgcgatgattggtgcttccgcagcactgtctctg
tctggtattccgttcaatggcccgattggtgctgcccgtgtaggttacatcaatgaccag
tacgtactgaacccgactcaggacgaactgaaagagagcaaactggacctggttgttgcc
ggtacagaagctgccgtgctgatggttgaatctgaagctgaactgctgagcgaagaccaa
atgctgggcgcagtggtgttcggtcatgaacaacagcaggttgttattcagaacatcaat
gaactggtgaaagaagccggtaaaccgcgttgggattggcagccggagccggtaaacgaa
gcgctgaacgcgcgcgttgctgcgctggctgaagctcgtctgagcgatgcttaccgcatc
accgacaaacaagagcgttatgcgcaggttgatgtcatcaaatctgaaaccatcgcgaca
ctgcttgctgaagacgaaaccctggacgaaaacgaactgggtgaaattctgcacgctatc
gagaaaaatgttgttcgtagccgcgtactggccggcgaaccgcgtatcgacggtcgtgaa
aaagatatgatccgtggtctggatgtgcgtactggtgtgctgccgcgtactcacggttct
gcgctgttcacccgtggtgaaacgcaggcgctggttaccgcaacgctgggtactgctcgt
gacgcgcaggttcttgatgaactgatgggcgaacgtaccgataccttcctgttccactac
aacttccctccgtactccgtaggcgaaaccggcatggtcggttctccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtaatgccggatatggacaaa
ttcccgtacaccgtacgtgttgtgtctgaaatcaccgaatccaacggttcctcttctatg
gcttccgtgtgcggcgcgtctctggcgctgatggacgccggtgtgccgatcaaagctgcc
gttgcgggtatcgcaatgggtctggtgaaagaaggcgacaactacgttgtactgtctgac
attttgggcgacgaagatcacctgggcgatatggacttcaaagttgcgggttctcgtgac
ggtatctctgcattgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgcactgaaccaggctaaaggtgcgcgtctgcatatcctgggcgtaatggaacaggcg
atcaatgcgccgcgcggtgatatctctgagttcgctccgcgtatccataccatcaagatc
aatccagacaagatcaaagacgttatcggtaaaggcggttctgtaatccgtgctctgacc
gaagaaactggcactaccatcgaaatcgaagatgacggtactgtgaagatcgcagcgacc
gacggcgagaaggcgaaaaacgctattcgtcgtatcgaagagatcactgcagaaatcgaa
gtaggccgcgtctacaatggtaaagtgacccgaatcgttgactttggcgcatttgttgcc
atcggcggcggtaaagaaggtctggtccacatctctcaaatcgctgataaacgcgttgag
aaagtgaccgattacctgcagatgggtcaggaagtaccggtgaaagttctggaagttgat
cgccagggccgtatccgtctgagcattaaagaagcgactgagcagtctcaacctgctgca
gcaccggaagctccggctgctgaacagggcgagtaa
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