Escherichia coli JJ1886: P423_19635
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Entry
P423_19635 CDS
T02896
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ecoj
Escherichia coli JJ1886
Brite
KEGG Orthology (KO) [BR:
ecoj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
P423_19635
Enzymes [BR:
ecoj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
P423_19635
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
CASP_dom
UL41A
Motif
Other DBs
NCBI-ProteinID:
AGY86211
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All DBs
Position
complement(4020133..4022121)
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AA seq
662 aa
AA seq
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MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA
ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQI
SLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINR
LILHPLRNIARELNAIPPQDLVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE
NAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLV
EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC
SIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL
ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL
EESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR
IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPED
SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE
EK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtaagtcgctcgttaacaatcaagcagatggcaatggtggcagccgttgtcctg
gtgttcgtttttattttttgcaccgttttgctgttccatctggtccagcagaatcgctat
aacacggctacgcaactggaaagcattgctcgctctgtccgcgaacccttatcttctgcc
attttgaaaggcgatattcccgaagcggaagctattcttgccagcattaaaccggcaggc
gtggtcagccgtgccgatgtagtgctgcccaaccagttccaggcgctgcgtaaaagtttt
attccagagcgtccggtgccggtaatggttactcgcctgtttgagctaccggtgcaaatc
tcgctgggcgtttactcgctggaacgtccggcaaacccgcagccaattgcctatctggtg
ctacaggcggattccttccgcatgtataagttcgtgatgagcaccctctcaacgttagtg
accatttacttacttttgtcgttaatattgactgtggcgattagctggtgcattaaccgc
ctgattttgcatccattacgcaatattgctcgcgaacttaacgccatcccaccccaggat
cttgttggtcaccaactggcattaccgcgtctgcatcaggacgatgaaatcggtatgttg
gtgcgcagttacaacctcaaccagcaattgctgcagcgccattatgaagaacagaacgaa
aatgcgatgcgcttcccggtgtcggatttgccgaacaaagccttgctgatggagatgctg
gagcaggtggtggcgcgtaaacaaaccaccgcgctgatgatcatcacctgtgaaaccctg
cgtgatactgcgggtgtgctgaaagaggcgcaacgagaaattctgctgctgacgctggtg
gaaaaactcaaatcggtactgtcgccacgcatgatcctcgcgcagattagcggttatgac
tttgctgtcattgccaacggtgtacaggaaccgtggcacgctatcacattaggtcagcaa
gtgctcactatcatgagcgagcgcctgccgattgaacgtattcaactccgtccgcactgt
agcattggcgtggcgatgttctacggcgatctcaccgccgaacagctttacagtcgcgct
atttctgcggcatttaccgctcgccataaaggcaaaaatcagattcagttctttgatccg
cagcagatggaagccgcccagaagcggttgacggaagagagcgatatccttaatgcactg
gaaaatcatcagtttgcgatttggttacagccacaggtcgagatgaccagcggtaaactg
gtcagtgcggaagtgttactgcgtatccagcaaccggatggcagttgggacctgccggat
ggcttaatcgatcgcattgagtgctgtgggctgatggttaccgtcggtcactgggtgctg
gaagagtcctgtcgattgcttgctgcctggcaagagcgcggcattatgctgcccttgtcg
gtaaacctctcagcgctgcaactgatgcatccaaatatggtggcggatatgctggaactg
ttaacccgctatcgcattcagccgggaacactgattctggaagtgacagaaagccgacgt
attgacgatcctcatgctgcggtggcaatcctccgtccgctgcgcaatgccggagttcgg
gtggcgctggatgatttcggcatgggctacgcagggctgcgtcagctgcagcatatgaaa
tcgttgccaatcgacgtactgaaaatcgacaaaatgtttgttgaaggtttgccggaagat
agcagcatgattgctgcaattatcatgctggcgcagagcctgaacctacaaatgattgcc
gaaggcgtggagactgaagcacaacgcgactggctggcaaaagcgggcgttggtattgcc
cagggcttcctttttgctcgcccactccctattgaaatcttcgaagagagttacctggaa
gaaaaatag
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