Escherichia coli JJ1886: P423_21085
Help
Entry
P423_21085 CDS
T02896
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ecoj
Escherichia coli JJ1886
Pathway
ecoj00300
Lysine biosynthesis
ecoj00470
D-Amino acid metabolism
ecoj01100
Metabolic pathways
ecoj01110
Biosynthesis of secondary metabolites
ecoj01120
Microbial metabolism in diverse environments
ecoj01230
Biosynthesis of amino acids
Module
ecoj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ecoj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
P423_21085 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
P423_21085 (dapF)
Enzymes [BR:
ecoj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
P423_21085 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AGY86464
LinkDB
All DBs
Position
4332938..4333762
Genome browser
AA seq
274 aa
AA seq
DB search
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGIGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcgaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcaccggagctgattcgtcgcctggcggatcggcacctggggata
gggtttgaccagctgctggtggttgagccaccgtatgatccggaactggattttcactat
cgcattttcaatgctgatggcagtgaagtagcgcagtgcggcaacggtgcgcgctgcttt
gcccgttttgtgcgcctgaaagggctgaccaataagcgcgatatccgcgtcagcaccgcc
aacggacggatggtgttgaccgtcaccgatgatgatctggtccgcgtcaatatgggcgaa
cccaacttcgaaccttctgccgtgccatttcgcgctaacaaagcggaaaagacctatatt
atgcgcgccgccgagcagacaatcttatgcggcgtggtgtcgatgggaaatccgcactgc
gtgattcaggttgatgatgttgatactgcggcggtagaaacgcttggtcctgttctggaa
agccacgaacgttttccggagcgcgccaatatcggttttatgcaagtggttaagcgcgag
catattcgtttacgcgtttatgagcgtggggcaggagaaacccaggcctgcggcagcggc
gcgtgtgcggcggtggcggtagggattcagcaaggtttgctggccgaagaagtacgcgtg
gaactccctggcggtcgtcttgatatcgcctggaaaggtccgggtcacccgttatatatg
actggcccggcggtacatgtctacgacggatttattcatctatga
DBGET
integrated database retrieval system