Escherichia coli JJ1886: P423_22575
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Entry
P423_22575 CDS
T02896
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ecoj
Escherichia coli JJ1886
Pathway
ecoj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P423_22575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecoj03400
]
P423_22575
DNA repair and recombination proteins [BR:
ecoj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P423_22575
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P423_22575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
AAA_25
NACHT
Viral_helicase1
T2SSE
cobW
ExoX-like_C
ScfRs
Motif
Other DBs
NCBI-ProteinID:
AGY86692
LinkDB
All DBs
Position
complement(4647395..4650217)
Genome browser
AA seq
940 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPDGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY
MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH
VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaacatcaacctcgtt
atcccccgcgacaagctcattgtcgtgaccgggctttcgggttctggcaaatcctcgctc
gctttcgacaccttatatgccgaagggcagcgccgttacgttgaatccctttccgcctac
gcgcggcagtttctgtcactgatggagaagccggacgtcgaccatattgaggggctttct
cctgccatctcaattgagcagaaatcgacgtctcataacccgcgctctacggtggggaca
atcaccgaaatccacgactatttgcgtctgctgtacgctcgcgttggtgagccgcgctgc
ccggaccacgatgtaccgctggcggcgcaaaccgtcagtcagatggtggataacgtgttg
tcccagccggacggcaagcgtctgatgctgctcgcgccaatcattaaagagcgcaaaggc
gaacacaccaaaacgctggagaacctggcaagccagggttacatccgtgctcgtattgat
ggcgaagtctgcgatctttccgatccgccgaaactggaactgcaaaagaaacataccatt
gaagtggtggttgatcgcttcaaagtgcgtgacgatcttacccaacgtcttgccgagtcg
tttgaaaccgcgctggagctttccggtggtaccgcggtagtggcggatatggacgacccg
aaagcggaagagctgctgttctccgccaactttgcctgcccgatttgcggttacagtatg
cgcgagctggaacctcgcctgttttcatttaacaacccggcgggagcctgcccgacctgt
gacggacttggcgtacagcaatatttcgatcctgaccgcgtgatccagaatccggaatta
tcgctggctggcggtgcgatccgtggctgggatcgccgcaacttctattatttccagatg
ctgaaatcgctggcagatcactataagttcgacgtcgaagcgccgtggggcagcctgagc
gcgaacgtgcataaagtggtgttgtacggttctggcaaagaaaatattgaattcaaatac
atgaacgatcgtggcgatacctccattcgtcgtcatccgttcgaaggcgtgctgcacaat
atggagcgccgttataaagagacggaatccagcgcggtacgtgaagaattagccaagttt
atcagcaatcgtccgtgcgccagctgcgaaggaacccgtctgcgtcgggaagcacgccac
gtgtatgtcgagaatacgccgctgcccgccatctccgacatgagcatcggtcatgcgatg
gaattcttcaacaatctcaaactcgcaggtcagcgggcgaagattgcagaaaaaatcctt
aaagagatcggcgatcgtctgaaattcctcgttaacgtcggcctgaattacctgacactt
tcccgctcagcagagacactttccggcggtgaagcccagcgtattcgtctggcgagccag
attggtgcaggcctggttggcgtgatgtacgtgctggatgagccgtctatcggcctgcac
cagcgcgataacgagcgcctgctgggtacgcttatccatctgcgcgatctcggtaatacc
gtgattgtggtggagcacgacgaagacgcgattcgcgccgctgatcatgtgatcgatatc
ggtccgggtgcgggtgttcacggcggtgaagtcgtcgcggaaggtccgctggaagcaata
atggcggtgcctgagtcgttgaccgggcagtacatgagcggtaaacgcaagattgaggtg
ccgaagaaacgcgttccggcaaatccggaaaaagtgctgaaactgacgggcgcacgcggc
aacaacctgaaagacgtgacgctgacgctgccggtgggtctgtttacctgcattaccgga
gtttcaggttccggtaaatcaacgctgattaacgacacactgttcccaattgcccaacgc
cagttgaatggtgcgaccatcgccgaaccagcaccgtatcgcgatattcaggggctggag
catttcgataaagtgatcgatatcgaccaaagcccaattggtcgtactccgcgttctaac
ccggcgacctataccggcgtgtttacgcctgtgcgcgaactgtttgcgggcgtaccggaa
tcccgtgcgcgtggttatacgccaggacgtttcagctttaacgttcgcggcggacgctgc
gaagcctgtcagggcgacggcgtgatcaaagtggagatgcacttcctgccggacatttac
gtaccgtgcgaccagtgcaaaggcaaacgctataaccgtgaaacgctggagattaagtac
aaaggcaaaaccatccacgaagtgctggatatgaccatcgaagaggcgcgtgagttcttt
gatgcggtgccagctctggcacgtaagctgcaaacattgatggacgttggtctgacgtat
attcgtctgggtcagtccgcaaccacactttctggtggtgaagcccagcgcgtgaagctg
gcgcgtgagctgtcaaaacgcggcaccgggcagacgctgtatattctcgacgagccgacc
accggtctgcacttcgccgatattcagcaactgctcgacgtactgcataaactgcgcgat
cagggcaataccattgtggtaattgagcacaatctcgacgtgatcaaaaccgctgactgg
attgtcgacctgggaccagaaggcggcagtgggggcggcgaaatcctcgtctccggtacg
ccagaaaccgtcgcagagtgcgaagcttcgcatacggcgcgcttcctcaagccgatgctg
taa
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