KEGG   Escherichia coli K-12 MDS42: ECMDS42_0858
Entry
ECMDS42_0858      CDS       T02541                                 
Symbol
ycdC
Name
(GenBank) predicted DNA-binding transcriptional regulator
  KO
K09017  TetR/AcrR family transcriptional regulator
Organism
ecok  Escherichia coli K-12 MDS42
Brite
KEGG Orthology (KO) [BR:ecok00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecok03000]
    ECMDS42_0858 (ycdC)
Transcription factors [BR:ecok03000]
 Prokaryotic type
  Helix-turn-helix
   TetR/AcrR family
    ECMDS42_0858 (ycdC)
SSDB
Motif
Pfam: TetR_C_3 TetR_N TetR_C_29
Other DBs
NCBI-ProteinID: BAL38143
LinkDB
Position
928459..929097
AA seq 212 aa
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP
SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML
AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV
EAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
NT seq 639 nt   +upstreamnt  +downstreamnt
atgacgcaaggcgcagtgaaaacaacgggtaaacgttcgcgcgcagtaagcgcgaagaaa
aaagcgattcttagcgcagcactggacactttttcacaattcggttttcacggcacaagg
ctggagcagatcgcagagttggcgggtgtttcaaaaaccaatctgctgtattactttccg
tcaaaagaggcgctgtatattgccgtgctgcggcagattctcgatatctggctggcaccg
ttaaaagcgtttcgtgaagatttcgccccgctggcggcgatcaaagagtacatccgtctg
aagctggaagtctcacgcgattatccgcaggcttcgcgcctgttctgtatggagatgctg
gcaggcgcgccgctgttaatggatgaactgacgggcgatttgaaggcattaattgatgag
aaatcggcgctgattgccggttgggtcaaaagcggcaaactcgcgccgattgatccgcag
catttgatttttatgatttgggcttccactcaacattacgccgatttcgcccctcaggtg
gaggcggtgacaggcgcgacgttgcgcgatgaggtatttttcaatcaaacggttgaaaac
gtgcagcggattattattgaggggattcgaccacgttaa

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