Escherichia coli K-12 MDS42: ECMDS42_0954
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Entry
ECMDS42_0954 CDS
T02541
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
ecok
Escherichia coli K-12 MDS42
Pathway
ecok04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ecok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
ECMDS42_0954 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecok03016
]
ECMDS42_0954 (trmU)
Enzymes [BR:
ecok01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
ECMDS42_0954 (trmU)
Transfer RNA biogenesis [BR:
ecok03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
ECMDS42_0954 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
QueC
Asn_synthase
DUF7411
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
BAL38233
LinkDB
All DBs
Position
complement(1024039..1025145)
Genome browser
AA seq
368 aa
AA seq
DB search
MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA
VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG
ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK
IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL
GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF
TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII
EQRLPLPV
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaccgcaaaaaaagtaatcgtcggcatgtccggcggtgtcgattcctccgtt
tctgcctggctgttgcaacaacagggatatcaggtcgaaggcctgtttatgaagaactgg
gaagaagacgacggtgaggaatattgcacagcggcagcggatctggctgatgcccaggct
gtctgcgacaagctcggcattgaactgcacaccgttaactttgctgccgagtactgggac
aacgtcttcgaactgttccttgccgaatataaagccggtcgcacgccgaatccggatatt
ctgtgcaacaaagagatcaaatttaaagccttcctcgaatttgccgccgaagatttaggt
gccgattatatcgctaccggtcattacgtacgtcgggccgatgtcgatggcaagagccgc
ctgctgcgtggtctggacagcaataaagaccagagctacttcctttatacgctcagccat
gagcagattgcgcaaagcctgttcccggtcggcgaactggaaaaaccgcaggtgcgtaag
attgctgaagatcttggtctggtcaccgcgaagaaaaaagactctaccggcatttgcttc
attggcgaacgtaaattccgcgagttcctgggccgttatctcccggcgcaaccgggcaaa
atcattaccgtcgatggcgatgaaattggtgagcaccaggggctgatgtatcacactctc
ggtcagcgtaaaggtctgggtatcggtggcaccaaagaaggtaccgaagaaccgtggtat
gtggtggacaaagacgtcgaaaacaacattctggttgtcgctcagggccatgaacacccg
cggctgatgtctgtcgggttgattgcccagcagttgcactgggtcgatcgcgaaccattc
accggcactatgcgttgcacggtaaaaacccgctatcgccagaccgatatcccttgcacc
gtcaaggcgctggacgatgatcgcattgaagtgattttcgatgaaccggttgccgccgtg
acgccgggccagtctgccgtcttctataacggtgaagtgtgcctcggtggcggtattatt
gagcagcgtctgccgctgccggtctga
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