Escherichia coli K-12 MDS42: ECMDS42_1162
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Entry
ECMDS42_1162 CDS
T02541
Symbol
ydcV
Name
(GenBank) predicted spermidine/putrescine transporter subunit
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
ecok
Escherichia coli K-12 MDS42
Pathway
ecok02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecok00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECMDS42_1162 (ydcV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecok02000
]
ECMDS42_1162 (ydcV)
Transporters [BR:
ecok02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ECMDS42_1162 (ydcV)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
BAL38420
LinkDB
All DBs
Position
1227324..1228118
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AA seq
264 aa
AA seq
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MHSERAPFFLKLAAWGGVVFLHFPILIIAAYAFNTEDAAFSFPPQGLTLRWFSVAAQRSD
ILDAVTLSLKVAALATLIALVLGTLAAAALWRRDFFGKNAISLLLLLPIALPGIVTGLAL
LTAFKTINLEPGFFTIVVGHATFCVVVVFNNVIARFRRTSWSLVEASMDLGANGWQTFRY
VVLPNLSSALLAGGMLAFALSFDEIIVTTFTAGHERTLPLWLLNQLGRPRDVPVTNVVAL
LVMLVTTLPILGAWWLTREGDNGQ
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcactctgaacgcgcaccgtttttcctcaaactggcggcctggggcggcgttgttttc
ctacattttcccatcctgataatcgccgcctatgcgtttaacactgaagatgcggcgttt
agttttccaccgcagggcctgacgctgcgctggtttagcgtggcagcacagcgtagtgat
attcttgatgccgtgacactgtcacttaaagtggcggcgctggcgacattaattgcgctg
gtgttagggacgctggcagctgccgcgctgtggcgacgagactttttcggcaaaaacgcc
atttcgctgttactgctgctgcccattgcgctgccgggcattgtcactggtctggcgtta
ttaaccgcctttaaaaccatcaatctggagccgggatttttcaccatcgtggtcggtcat
gcgactttttgtgtagttgtggtgtttaacaatgtcatcgcccgttttcgccgcacctcc
tggagtctggttgaggcgtcaatggatcttggggccaatggctggcaaaccttccgctac
gtagtgttgccgaatctcagttcggcgttactggcaggaggaatgctggcgtttgccttg
tcgttcgatgaaatcatcgttacgacctttacggcaggtcatgaacgaacgttaccgttg
tggttgctcaatcagcttgggcgaccgcgtgatgtaccggtaactaacgtggtggcactg
ctggttatgttggtaacaaccttgccgatcctgggggcctggtggctaacccgcgaaggc
gacaatggtcaataa
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