Escherichia coli K-12 MDS42: ECMDS42_1320
Help
Entry
ECMDS42_1320 CDS
T02541
Symbol
ydhM
Name
(GenBank) predicted DNA-binding transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
ecok
Escherichia coli K-12 MDS42
Brite
KEGG Orthology (KO) [BR:
ecok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecok03000
]
ECMDS42_1320 (ydhM)
Transcription factors [BR:
ecok03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
ECMDS42_1320 (ydhM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_13
TetR_N
TetR_C_13_2
TetR_C_6
Motif
Other DBs
NCBI-ProteinID:
BAL38577
LinkDB
All DBs
Position
1407690..1408205
Genome browser
AA seq
171 aa
AA seq
DB search
MGLSELLKTAEVPKGSFYHYFRSKEAFGVAMLERHYAAYHQRLTELLQSGEGNYRDRILA
YYQQTLNQFCQHGTISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENH
CLTFCGEPLQQAQVLYALWLGANLQAKISRSFEPLENALAHVKNIIATPAV
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggggctaagcgaattactaaaaaccgctgaagtgccgaaagggtccttctatcactac
tttcgctctaaagaagcgtttggcgttgccatgcttgagcgtcattacgccgcatatcac
cagcgactgactgagttgctgcaatccggcgaaggtaactaccgcgaccgcatactggct
tattaccagcaaacactgaaccagttttgccaacatggaaccatcagtggttgcctgaca
gtaaaactctctgccgaagtgtgcgatctgtcagaagatatgcgcagcgcgatggataaa
ggtgctcgcggcgtgatcgccctgctctctcaggcgctggaaaatggccgtgagaaccat
tgtttaaccttttgtggcgaaccgctgcaacaggcacaagtgctttacgcactgtggctt
ggcgcgaatctgcaggccaaaatttcgcgcagtttcgagccactggaaaacgcgctggcc
catgtaaaaaacattattgcgacgcctgccgtttag
DBGET
integrated database retrieval system
