Escherichia coli K-12 MDS42: ECMDS42_1359
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Entry
ECMDS42_1359 CDS
T02541
Symbol
ydiJ
Name
(GenBank) predicted FAD-linked oxidoreductase
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
ecok
Escherichia coli K-12 MDS42
Pathway
ecok00310
Lysine degradation
ecok01100
Metabolic pathways
ecok01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ecok00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
ECMDS42_1359 (ydiJ)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
Fer4_20
Fer4_17
Fer4_18
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
BAL38613
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All DBs
Position
complement(1447212..1450268)
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AA seq
1018 aa
AA seq
DB search
MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTDNSIYQLLPDAVVFPRS
TADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVDMSRHMNRIIEINPEEGWV
RVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGV
RAVLLGGDILDTQPLPVELAETLGKSNTTIGRIYNTVYQRCRQQRQLIIDNFPKLNRFLT
GYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARLDITRLPKVRRLVNVKYDSFDSALR
NAPFMVEARALSVETVDSKVLNLAREDIVWHSVSELITDVPDQEMLGLNIVEFAGDDEAL
IDERVNALCARLDELIASHQAGVIGWQVCRELAGVERIYAMRKKAVGLLGNAKGAAKPIP
FAEDTCVPPEHLADYIAEFRALLDSHGLSYGMFGHVDAGVLHVRPALDMCDPQQEILMKQ
ISDDVVALTAKYGGLLWGEHGKGFRAEYSPAFFGEELFAELRKVKAAFDPHNRLNPGKIC
PPEGLDAPMMKVDAVKRGTFDRQIPIAVRQQWRGAMECNGNGLCFNFDARSPMCPSMKIT
QNRIHSPKGRATLVREWLRLLADRGVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEY
DFSHEVKEAMSGCLACKACSTQCPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYA
PLMARAPKTFNFFINQPLVRKLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLESL
NAEQKARTVLVVQDPFTSYYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRF
AKTAKKTADFLNRMAKLGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASAL
ESQPVATVSGESWYFFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHE
AKNHENSLGIYELSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgattccacagatttcccaggcacccggcgtcgttcaactggtgcttaattttttgcaa
gagctggagcaacaaggttttaccggcgatacggcgacaagttatgccgatcgtctgaca
atgtcgaccgacaacagtatttaccaacttctccccgatgcggtggtatttccgcgttca
accgcagatgtggcgctgatcgcccgtcttgccgcgcaggaacgctattcatcgctgatc
tttaccccccgcggcggcggcaccggcactaacggtcaggcgctcaaccaggggattatt
gttgatatgtcccgccatatgaaccgcatcatcgaaattaaccctgaagagggctgggtg
cgcgttgaggccggggtgataaaagatcaactcaatcagtacctgaaaccgttcggctac
ttttttgcgccggaactttcgaccagcaaccgggcaacgctcggtgggatgatcaatacc
gatgcatccggtcagggatcgctggtctatggcaaaacgtcagatcacgtacttggcgta
cgcgcggtgttgttggggggcgatattctcgatacgcaacctttacccgtcgaattggcg
gaaacgctgggtaaatccaataccacaatcgggcgaatttataacacggtttatcaacgt
tgccgtcagcaacgccagttaattatcgacaacttccccaaacttaaccgctttcttacc
ggttacgatctgcgtcatgtctttaacgatgagatgaccgagttcgacctgacgcgcatt
ctgacgggttcagaagggacgctggcctttattaccgaagcgcggctggatattacacgc
ttgcctaaagtgcgccgtctggtgaacgtcaaatatgactcttttgactctgcgctgcgt
aacgcgccgtttatggttgaggcgcgggcgctttcggtagagacggtggactcaaaagtg
ctgaatctggcgcgggaagatattgtctggcattccgtcagcgagttgattaccgatgtg
cctgaccaagagatgctcgggctgaacattgtggaatttgctggtgatgatgaggcgctg
attgatgagcgggtaaatgcactctgtgcgcggttggatgagctgatcgccagtcatcaa
gcaggtgtcatcggctggcaggtgtgccgtgagctggcgggggttgaacgtatctatgca
atgcgcaaaaaagccgttggtctgcttggcaatgccaaaggtgccgctaagccaattccg
tttgctgaggatacctgcgtaccgccggaacacctggcggattatattgctgaatttcgc
gcgctgctcgacagccacggcttaagctacggtatgttcggtcacgtcgacgcaggtgtc
ttgcacgtccgtccagcgctggatatgtgcgatcctcaacaagagattttgatgaagcaa
atctctgatgacgtggtggcgctgactgcgaaatacggtggtttgttgtggggcgagcac
ggcaaaggttttcgcgctgaatacagcccggcgtttttcggtgaggaactttttgcagaa
ctgcgcaaagtgaaagcggcatttgacccgcataaccgactcaacccagggaagatttgc
ccgccagaaggtctcgatgcgccgatgatgaaagtggacgcggtgaagcgcggtacattc
gatcggcagatccccattgcggtacgccagcagtggcgcggtgcgatggagtgtaacggc
aacggtttatgcttcaactttgatgcccgtagtccgatgtgtccgtcgatgaagatcacc
cagaaccggattcattcaccgaaagggcgcgcaacgctggtgcgtgaatggctgcgtttg
ttggcggatcgcggcgttgatccactcaaactggaacaagaactgcctgaatccggcgtc
agtttgcggacgttaattgcccgcacgcgcaatagctggcatgcgaataaaggcgaatat
gacttctcacacgaagtcaaagaggcgatgtcgggctgtctggcctgtaaagcgtgttcg
acccagtgccccatcaaaattgatgtgccggagtttcgctctcgttttctgcagctctat
cacacccgttatttacgcccgctgcgcgaccacctcgtcgctacggtcgagagctacgcg
ccgctgatggcacgcgcgccgaaaacctttaacttcttcattaaccagccgctggtgcgc
aaactctcggaaaaacatatcggcatggttgatttgccgctgctgtcggtcccctcgcta
caacaacaaatggtggggcatcgctcggcaaacatgacgctggaacagcttgaatctctc
aatgcagagcagaaagcgcgcacagtgttggtggtgcaggacccctttaccagctattac
gatgcgcaagtggtggcggattttgtccgtctggtcgaaaaattaggtttccagcctgtg
ttactgccattttcgccaaatggcaaagcccagcatattaaaggttttcttaatcgtttt
gcgaagacggcgaaaaagacggcggatttcctcaaccgtatggcgaagctgggtatgcca
atggtgggcgtcgatccggcgctggtactttgttatcgcgatgaatataaactggcgctg
ggcgaggagcgtggcgagtttaacgtcttactggcgaatgaatggctggcaagcgcactt
gagtcacagccagtggctacagtcagcggtgaatcatggtatttctttggtcactgtacc
gaagttaccgccttgccgggtgcgccagcacaatgggccgcgatatttgcccgttttggc
gcgaaactggaaaatgtcagcgtgggttgctgcggcatggcagggacttacggacatgaa
gcgaaaaaccatgaaaattcgctcgggatctatgagttatcctggcatcaggctatgcag
cgactgccgcgtaaccgctgtctggcgaccggatattcctgccgtagccaggtaaaacgg
gttgaaggcacgggggtacgccatcctgtgcaggctttactggagattattaaatga
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