Escherichia coli K-12 MDS42: ECMDS42_2346
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Entry
ECMDS42_2346 CDS
T02541
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase, PLP-binding
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ecok
Escherichia coli K-12 MDS42
Pathway
ecok00300
Lysine biosynthesis
ecok00470
D-Amino acid metabolism
ecok01100
Metabolic pathways
ecok01110
Biosynthesis of secondary metabolites
ecok01120
Microbial metabolism in diverse environments
ecok01230
Biosynthesis of amino acids
Module
ecok_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ecok00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ECMDS42_2346 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ECMDS42_2346 (lysA)
Enzymes [BR:
ecok01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ECMDS42_2346 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
BAL39538
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All DBs
Position
complement(2488172..2489434)
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AA seq
420 aa
AA seq
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MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVN
AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR
HHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVD
TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDA
GFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRA
LPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccacattcactgttcagcaccgataccgatctcaccgccgaaaatctgctgcgtttg
cccgctgaatttggctgcccggtgtgggtctacgatgcgcaaattattcgtcggcagatt
gcagcgctgaaacagtttgatgtggtgcgctttgcacagaaagcctgttccaatattcat
attttgcgcttaatgcgtgagcagggcgtgaaagtggattccgtctcgttaggcgaaata
gagcgtgcgttggcggcgggttacaatccgcaaacgcaccccgatgatattgtttttacg
gcagatgttatcgatcaggcgacgcttgaacgcgtcagtgaattgcaaattccggtgaat
gcgggttctgttgatatgctcgaccaactgggccaggtttcgccagggcatcgggtatgg
ctgcgcgttaatccggggtttggtcacggacatagccaaaaaaccaataccggtggcgaa
aacagcaagcacggtatctggtacaccgatctgcccgccgcactggacgtgatacaacgt
catcatctgcagctggtcggcattcacatgcacattggttctggcgttgattatgcccat
ctggaacaggtgtgtggtgctatggtgcgtcaggtcatcgaattcggtcaggatttacag
gctatttctgcgggcggtgggctttctgttccttatcaacagggtgaagaggcggttgat
accgaacattattatggtctgtggaatgccgcgcgtgagcaaatcgcccgccatttgggc
caccctgtgaaactggaaattgaaccgggtcgcttcctggtagcgcagtctggcgtatta
attactcaggtgcggagcgtcaaacaaatggggagccgccactttgtgctggttgatgcc
gggttcaacgatctgatgcgcccggcaatgtacggtagttaccaccatatcagtgccctg
gcagctgatggtcgttctctggaacacgcgccaacggtggaaaccgtcgtcgccggaccg
ttatgtgaatcgggcgatgtctttacccagcaggaagggggaaatgttgaaacccgcgcc
ttgccggaagtgaaggcaggtgattatctggtactgcatgatacaggggcatatggcgca
tcaatgtcatccaactacaatagccgtccgctgttaccagaagttctgtttgataatggt
caggcgcggttgattcgccgtcgccagaccatcgaagaattactggcgctggaattgctt
taa
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