Escherichia coli K-12 MDS42: ECMDS42_3136
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Entry
ECMDS42_3136 CDS
T02541
Symbol
recF
Name
(GenBank) gap repair protein
KO
K03629
DNA replication and repair protein RecF
Organism
ecok
Escherichia coli K-12 MDS42
Pathway
ecok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ECMDS42_3136 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecok03400
]
ECMDS42_3136 (recF)
DNA repair and recombination proteins [BR:
ecok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ECMDS42_3136 (recF)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_27
AAA_29
ABC_tran
AAA_16
AAA_13
Motif
Other DBs
NCBI-ProteinID:
BAL40291
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Position
complement(3309361..3310434)
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AA seq
357 aa
AA seq
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MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV
IRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPE
GFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYEQLRPWDKE
LIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNFER
DRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYL
IDDFASELDDERRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTVEKGKITD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcacccgcttgttgatccgcgatttccgcaacattgaaaccgcggatctcgcc
ttatctcccggctttaactttctggtaggtgccaacggcagtggcaaaaccagcgtgctg
gaagccatctatacgctcggccatggtcgggcgtttcgcagtttgcagattggtcgcgtc
attcgccatgagcaggaggcgtttgttctccacgggcgattacagggcgaagagcgcgag
acagcgattggcttaaccaaagacaaacagggcgacagcaaagtccgcatcgacggtaca
gacgggcataaggtcgcggaactggcgcacctgatgccaatgcagttgataacgccagaa
gggtttactttactcaacggcggccccaaatacagaagagcattcctcgactggggatgc
tttcacaacgaacccggatttttcaccgcctggagcaatctcaagcgattgctcaagcag
cgcaatgcggcgctgcgccaggtgacacgttacgaacagctacgcccgtgggataaagag
ctgatcccgctggcggagcaaatcagcacctggcgcgcggagtatagcgccggtatcgcg
gccgatatggctgatacctgtaagcaatttctccctgagttttctctgactttctctttc
cagcgcggctgggagaaagagacagaatatgctgaggtgctggaacgtaattttgaacgc
gatcgccagctaacctacaccgcgcacggcccgcacaaagcggacttacgcattcgcgcc
gacggtgcgccggtggaagataccttatcgcgtgggcagcttaagctgttgatgtgcgcc
ttacgtctggcgcaaggagagttcctcacccgtgaaagcgggcggcggtgtctctacctg
atagatgattttgcctctgagcttgatgatgagcgtcgcgggctgcttgccagccgctta
aaagcgacgcaatcacaggtctttgtcagcgcgatcagtgctgaacacgttatagacatg
tcggacgaaaattcgaagatgtttaccgtggaaaagggtaaaataacggattaa
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