Escherichia coli K-12 MDS42: ECMDS42_3373
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Entry
ECMDS42_3373 CDS
T02541
Symbol
priA
Name
(GenBank) primosome factor n'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ecok
Escherichia coli K-12 MDS42
Pathway
ecok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ECMDS42_3373 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecok03400
]
ECMDS42_3373 (priA)
Enzymes [BR:
ecok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECMDS42_3373 (priA)
DNA repair and recombination proteins [BR:
ecok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECMDS42_3373 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
WHD_PriA
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
BAL40505
LinkDB
All DBs
Position
complement(3553825..3556023)
Genome browser
AA seq
732 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL
KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA
TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET
PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG
STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI
LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgcccacgttgccttgcccgttccgcttcctcgtacctttgactatctgctg
ccagaaggcatgacggttaaagctgggtgtcgcgtgcgcgtgccgtttggcaaacagcag
gagcgcatcgggattgtggtatcagttagcgatgccagcgaactgccgctcaatgagcta
aaagcggtagtcgaagtgctggatagtgagccggtgtttactcactccgtctggcgattg
ctgctatgggcggcagattactatcatcatccgattggcgatgtgctgtttcatgccttg
ccgattttactacgccaggggcggcctgcggcgaacgcgccgatgtggtactggtttgcc
actgaacaaggccaggcggtggatctgaacagcctgaaacgctcccccaagcaacaacag
gcgctggcggcgttacggcaaggcaaaatctggcgcgaccaggtcgccacgctcgaattt
aatgatgccgcgttgcaggcgctacgcaaaaaaggtctgtgtgatttagcaagtgaaaca
ccagagtttagcgactggcgaacgaactatgccgtttctggtgagcggttgcgattgaat
accgaacaggccaccgccgttggcgcaattcatagcgcggcagatactttttctgcctgg
ctgctggcgggcgttaccggttccggtaaaacggaggtttatctcagcgtactggaaaac
gtgctcgctcagggcaaacaggcgctggtgatggtgccggaaatcggcctgacaccgcaa
actatcgcccgttttcgtgaacgttttaatgcccccgtggaagttctgcattccggcctg
aacgacagcgagcgtctttcggcgtggctgaaagcgaaaaatggtgaggcggcgattgtg
atcggcacccgctccgcgctgtttacgccgtttaaaaatctcggcgtgattgtcattgat
gaagagcacgacagctcctacaagcagcaggaaggctggcgctatcatgcccgcgacctg
gcggtgtatcgtgcgcacagcgagcaaatcccgattattcttggctccgcaacgcccgcg
ctggaaacgttatgcaacgtccagcagaaaaaataccgcctgctgcgcctgacccgtcgg
gcagggaatgcgcgtccggcaattcaacatgtgctggatttaaaaggtcagaaggtgcag
gcaggtctggctccggcgttaatcactcgtatgcgccagcatttacaggctgataaccag
gtcattctctttcttaaccgccgtggctttgcgcctgcactgctgtgccacgactgtggc
tggattgccgaatgcccacgttgcgatcactactacacgctgcatcaggcgcagcaccat
ctgcgctgccaccactgtgacagtcagcgtccggtgccgcgccagtgcccttcctgcggt
tccacgcacctggtccccgtggggctgggcaccgaacagcttgaacagacgctcgcgccg
ttgttccccggcgtgcccatttctcgtatcgaccgcgataccaccagccgcaaaggggcg
ctggaacagcaactggcagaagtacatcgcggcggcgcgcggattttgattggtacacaa
atgctggcgaaaggtcaccatttcccggatgtgacgctggttgcattactggacgtggac
ggcgcgctgttttctgccgattttcgctcggcagagcgtttcgctcagctttacacccag
gtcgccggtcgtgccgggcgtgcgggtaaacagggcgaagtggtgctgcaaacgcaccat
ccggaacatcctctgttgcaaacgttgctctataaaggctacgacgcctttgccgaacag
gcgctggctgagcggcgaatgatgcagctaccgccgtggaccagccatgtgattgtgcgt
gcggaagatcataacaatcagcacgcgccattgttcctgcaacaactgcgtaatctgatc
ctctccagcccactggcagacgagaaactgtgggttctcggtccggttccggctctggca
cctaaacgtggcggtcgctggcgctggcagatattgttgcagcacccttcccgcgtgcgc
ttgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaag
gtgaaatgggtgctggatgttgatccgattgagggttaa
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