Escherichia coli LY180: LY180_01085 Help Entry LY180_01085       CDS       T02846                                  Name (GenBank) type VI secretion protein IcmF   KO K11891   type VI secretion system protein ImpL Organism ecol  Escherichia coli LY180 Pathway ecol03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:ecol00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     LY180_01085  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:ecol02044]     LY180_01085 Secretion system [BR:ecol02044]  Type VI secretion system   Imp/Vas secretion system core components    LY180_01085 SSDB OrthologParalogGFIT Motif Pfam:  IcmF-related IcmF-related_N IcmF_C IcmF_helical AAA_16 nSTAND_NTPase5 HAD Hydrolase PRM1 Motif Other DBs NCBI-GeneID:  16977892 NCBI-ProteinID:  AGW07677 LinkDB All DBs Position complement(242268..245792) Genome browser AA seq 1174 aa AA seqDB search MFRLPTPRLLSGLKSALRPAMPRFKVSAFWLLILAWIFLLVWIWWKGPMWTLYEEQWLKP LANRWLATAAWGIIALVWLTVRVMKRLQQLEKMQKQQREEAVDPLSVELNAQQRYLDRWL LRLQRHLDNRRFLWQLPWYMVIGPAGSGKTTLLREGFPSDIIYAPEGARGAEQRLYLTPH VGKQAVIFDIDGTLCAPADADILHRRLWEHALGWLKEKRARQPLNGIILTLDLPDLLTAD KRRREHLLQTLRSRLQDIRQHLHCQLPVYVVLTRLDLLQGFAALFQSLNRQDRDAILGVT FTRRAHENDDWRTELNAFWQTWVDRMNLALPDLMVAQTHTRASLFSFSRQMQGSREPLVS LLEGLLDGENMNVMLRGVYLTSSLQRGQMDDIFTQSAARQYRLGNNPLASWPLVDTAPYF TRSLFPQALLAEPNLATESRAWLIRSRRRLTVFSATGGVAALLLITGWHHYYNGNYQSGI TVLKQAKAFMDVPPPQGEDDFGNLQLPLLNPVRDATLAYGDWGDRSRLADMGLYQGRRIG PYVEQTYLQLLEQRYLPSLFNGLVKAMNAAPPESEEKLAVLRVMRMLEDKSGRNNEVVKQ YMAKRWSEKFHGQRDIQAQLMSHLDYALAHTDWHAERQAGDGDAISRWTPYDKPVVSAQK ELSKLPVYQRVYQSLKTRALGVLPADLNLRDQVGPTFDQVFTSADDNKLVVPQFLTRYGL QSYFVKQRDELVELTAMDSWVLNLTRSVKYSDADRAEIQRQLTEQYISDYTATWRAGMDN LNIRNFESIGQLTGALEQVISGDLPLQRALTVLRDNTQPGVFSEKLSAKEREEALAEPDY QLLTRLGHEFAPENSTLAVQKDKESTMQAVYQQLTELHRYLLAIQNAPVPGKSALKAVQL RLDQNSSDPIFATRQMAKTLPAPLNRWVGRLADQAWHVVMVEAVHYMEVDWRDSVVKPFN EQLANNYPFNPRSAQDASLDAFERFFKPDGILDTFYQQNLKLFIDNDLSLEDGDNNVIIR EDIIAQLETAQKIRDIFFSKQNGLGTSFAVETVSLSGNKRRSVLNLDGQLVDYSQGRNYT AHLVWPNNMREGNESKLTLIGTSGNAPRSISFSGPWAQFRLFGAGQLTGVQDGNFTVRFS VDGGAMTYRVHTDTEDNPFSGGLFSQFGLSDTLY NT seq 3525 nt NT seq  +upstreamnt  +downstreamnt gtgttcagattaccaacaccccgactactcagcggactcaaatcagccctgcgaccggcg atgccccggtttaaagtctctgctttctggctgctgatactggcgtggatttttctgctg gtgtggatctggtggaaaggcccgatgtggacgctgtatgaagaacagtggctcaaacca ctggcgaaccgctggctggcaacggcggcgtgggggattattgccctggtgtggcttacc gtccgggtgatgaagcgcctgcaacagcttgaaaaaatgcaaaagcaacagcgcgaggaa gccgttgatccgctcagcgtggaactgaacgcccagcagcgttatcttgaccgctggctg ctgcgcctgcaacgccatctcgacaaccgccgtttcctgtggcagttgccgtggtatatg gtcatcggcccggcgggcagtggcaaaacgacactgctgcgcgaggggtttccgtccgac attatttatgccccggagggcgcacgcggcgcagaacaacgcctgtacctcacgccccat gtcggtaaacaggcggtgatctttgatatcgacggcacactctgcgctcccgctgatgcg gatatcctgcatcgccgtctgtgggaacatgccctcggctggctgaaagaaaagcgcgcg cgccagccgctgaacgggattattctgacactcgatttacccgatctgcttaccgcagac aaacgccgccgcgagcatctgttacagacgctgcgcagccgcttacaggatatacgccag catcttcactgccagttaccggtttacgtggtactgacccggcttgatttattacagggt tttgccgccctgttccagtcactcaacagacaggatcgcgatgcgattctgggcgtcacg ttcacccgccgtgcccatgaaaatgatgactggcgaacagagttgaatgctttctggcag acatgggtggatcgaatgaatctggcgttgccggatctgatggtcgctcagactcacacc cgcgcgtctttattcagtttttcccgccagatgcagggaagccgtgaaccgctggtgtca ctgcttgagggtctgcttgatggcgaaaatatgaacgtgatgctgcgtggtgtctatctc acctcttcgcttcagcgtggacagatggatgatatattcacccagtctgccgcccgccag taccggctgggcaataacccactggcgtcctggcccctggtggacaccgcgccttatttc acccgcagcctgttcccgcaggcattactcgcagagcctaatctggcaacagagagccgc gcctggctgatacgttcccgtcgccgcctgacggttttctctgccacaggcggcgtggca gcactgctgctcatcaccggctggcatcactattacaacggtaactatcagtccggcatc accgtgcttaagcaggccaaagcctttatggacgtgccgcctccgcagggggaagatgac tttggcaacctgcaactgccgctcctgaacccggtacgcgatgccacactggcctatggc gactggggcgaccgcagccgtctggccgatatgggactgtaccagggacgacgtatcggg ccttatgtggaacagacctatctgcaactgctggagcaacgttacctgccctcgctgttt aacgggctggtcaaagcgatgaacgccgcgccgccggagagtgaagaaaaactcgcggtg ctgcgcgtaatgcgaatgctggaggacaaaagcggacgtaacaatgaggtggtgaagcag tatatggcaaaacgctggagcgaaaaattccacggccagcgcgatatccaggcacaactg atgtcccatcttgactacgcgctggctcatactgactggcatgcagagcgtcaggcgggc gacggtgacgccatcagccgctggacgccatatgacaagcccgtggtatcagcacagaaa gaactgagcaaactgcctgtctaccagcgggtttaccagagcctgaaaacgcgggcgctg ggcgttcttcctgccgacctcaatctgcgtgaccaggtagggccaacctttgaccaggtg tttacatctgccgatgacaacaaactggttgttccacagtttcttacccgttacggcctg caaagctattttgtaaaacagcgcgatgaactggttgaactgacggcgatggattcctgg gtacttaaccttacccgcagcgtgaaatacagtgacgccgaccgtgcggaaatccagcgc cagttgaccgagcagtatatcagcgactacaccgccacctggcgggccgggatggacaat ctgaatatccgcaattttgagtccatcggacaactgaccggggcgctggagcaggttatc agcggcgacctgcctttgcagcgggcgctaaccgtgctgcgtgacaacacacagccaggc gtcttttctgaaaaactctctgccaaagaacgggaggaagccctggcagagccggattac cagttactcacccgcctcgggcatgaattcgccccggaaaacagtaccctggcagtacag aaagacaaagaaagcacgatgcaggccgtgtatcagcaactcaccgagttgcaccgctac ctgctggcaatccagaacgcgcctgtaccagggaaatcggcgctgaaagccgtgcagtta cggcttgatcagaacagcagcgatccgatattcgccacccgccagatggcaaaaacgctg cctgctccgctcaaccgctgggttggcaggctggctgaccaggcctggcatgtggtgatg gtggaggctgttcattatatggaagtggactggcgcgacagcgtggtgaaaccgtttaac gagcaactggcaaataactatccgtttaatccgcgttctgcacaggatgcctcactggat gccttcgaacgcttctttaaaccggatggcatactggataccttctaccagcagaacctg aagctgtttatcgataatgacctgagtctggaggatggcgataacaacgtcattattcgc gaagatattattgcgcaactggaaactgcgcagaaaatccgtgacatcttcttcagcaaa cagaacggtctgggaacatcctttgccgtggaaacggtatcgctttcaggcaataaacgc cgcagtgtactgaaccttgacggtcagttagtcgattacagccagggccgtaactatacc gcccatctggtctggcctaacaacatgcgcgaaggcaacgaaagtaagctgacgctcatc ggcaccagcggcaacgcgccgcgcagtatcagcttcagcgggccgtgggcgcagttccgc ctgttcggggccggacaactgaccggagtacaggatggcaactttaccgtgcgctttagc gtggacggtggcgcgatgacctaccgtgtgcataccgacacggaagataacccgttcagc ggtgggttgttcagccagtttggtctgtcagacacactgtactga

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