Escherichia coli LY180: LY180_02120
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Entry
LY180_02120 CDS
T02846
Name
(GenBank) transcriptional regulator
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
ecol
Escherichia coli LY180
Brite
KEGG Orthology (KO) [BR:
ecol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecol03000
]
LY180_02120
Transcription factors [BR:
ecol03000
]
Prokaryotic type
Helix-turn-helix
IclR family
LY180_02120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR_C
MarR_2
HTH_24
MarR
GAF
HTH_Crp_2
HTH_36
GAF_2
HTH_11
HTH_29
GAF_3
HTH_28
TrmB
GntR
HTH_23
BRISC_FAM175B_helical
HTH_DeoR
Rrf2
Motif
Other DBs
NCBI-GeneID:
16978099
NCBI-ProteinID:
AGW07813
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All DBs
Position
complement(447948..448895)
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AA seq
315 aa
AA seq
DB search
MIFYCALSIGRVFSATIKTCPNVHQVHNVVLTIEMSINMQNNEQTEYKTVRGLTRGLMLL
NMLNKLDGGASVGLLAELSGLHRTTVRRLLETLQEEGYVRRSPSDDSFRLTIKVRQLSEG
FRDEQWISALAAPLLGDLLREVVWPTDVSTLDVDAMVVRETTHRFSRLSFHRAMVGRRLP
LLKTASGLTWLAFCPEQERKELIEMLAARPGDDYQLAREPLKLQAILARARKEGYGQNYR
GWDQEEKIASIAVPLRSEQRVIGCLNLVYMASAMTIEQAAEKHLPALQRVAKQIEEGVES
QAILVAGRRSGVHLR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgattttttattgtgcgctcagtataggaagggtgttttcggctacaatcaaaacatgc
ccgaatgtgcaccaggtgcacaacgttgttttaactatagaaatgtcaattaatatgcag
aacaatgagcagacggaatacaaaaccgtgcgcggcttaacccgcggtctaatgttatta
aatatgttaaataaacttgatggcggtgccagcgtcgggctgctggcggaactcagcggc
ctgcatcgcaccactgtgcggcgactgctggagacgctgcaggaagagggatatgtccgc
cgtagcccctccgatgacagttttcgtctgaccatcaaagtgcggcaattaagcgaagga
tttcgtgacgaacagtggatttctgcactggcggccccgctgctgggcgatctgttgcgc
gaagtggtatggccaacagatgtgtccaccctggatgttgatgcaatggtggtacgcgaa
accacccaccgtttcagccgcttatcctttcaccgggcaatggtcgggcgacgtttaccg
ctcctgaaaaccgcctcgggcctgacctggctggccttttgcccggaacaagaacgcaag
gaattaatcgaaatgttagccgcccgccccggtgatgactatcaactggcacgagaaccg
ttaaagctgcaagccattctggcgcgcgcgcgcaaagagggttacggacagaactaccgc
ggctgggatcaggaggagaagatcgcctctatcgccgtaccgctgcgcagtgaacaacgg
gtgattggctgtctgaatctggtgtatatggcgagcgcaatgaccattgaacaggcagcg
gaaaagcatcttccggcgctacaacgggtagcaaaacagatcgaagaaggggttgaatcg
caggctattctggtggccggacggcgaagcggcgtgcatttgcgttaa
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