Escherichia coli LY180: LY180_03065
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Entry
LY180_03065 CDS
T02846
Name
(GenBank) type IV secretion protein Rhs
Organism
ecol
Escherichia coli LY180
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
PAAR_motif
DUF6531
RHS
DUF4595
BA14K
Motif
Other DBs
NCBI-GeneID:
16978287
NCBI-ProteinID:
AGW11487
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Position
complement(650811..655631)
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AA seq
1606 aa
AA seq
DB search
MSEGPGGPQGATAGGTLAMRMLSQQAMVASQMKRAANDKAIAQMLAAKKSGPPAARLGDE
IQHKSFLGALAGAVLGAIVTIAEGCLIMAACATGPYALVLVPALMYASYKASDYVEEKQN
QLESWINSFCDTDGAINTGSENVKINGKPAARAAVTLPPPPPPGAIPEVPQGEPSWGDIA
TDLLESAAEKAVPLAKAWGNAVITLTDSNAGFMDRVSAGASLLFPAGPVLMEFATMVGGR
GEIKKDVDFPEAGEDTALCDKENKPPRIAQGSSNVFINNQPAARQGDKLECSAAIVGGSP
DVFIGGEQVTYLDIQPEFPPWQRMILGGITIASYLLPPAGLLGKLKNLARLGKLGNLLGK
SGKLLGAKLGAFLGKTGKSLKSIANKVIRWVTDPVDPVTGAYCDERTDFTLGQTLPLSFT
RFHSSVLPLHGLTGVGWSDSWSEYAWVREQGNRVDIITQGATLRFAFDGDSDTAVNPYHA
QYILRRRDDYLELFDRDALSSRFFYDAFPGMRLRHPVTDDTSDDRLAHSPGDRMYMLGGM
SDTASNRITFERDSQYRITGVSHTDGIRLKLTYHASGYLKAIHRTDNGIQTLATYEQDAR
GRLTEADARLDYHLFYEYDAADRIIRWSDNDQTWSRFTYDEQGRCVNVTGAEGYYNATLD
YGDGCTTVTDGKGIHRYYYDPDGNILREEAPDGSTTTYEWDEFHHLLARHSPAGRVEKFE
YNAALGQLSRYTAADGAEWQYRYDERGLLSNITDPAGQTWTQQCDERGLPVSLVSPQGEE
TRLAYTAQGLLSGIFRQDERRLGIEYDHHNRPETLTDVMGREHHTEYSGHDLPVKMRGPG
GQSVRLQWQQHHKLSGIERAGTGAEGFRYDRHGNLLAYTDGNGVVWTMEYGPFDLPVART
DGEGHRWQYRYDKDTLQLTEVINPQGESYLYVLDNCGRVTEERDWGGVVWRYRYDADGLC
TARVNGLEETILYSRDAAGRLAEVITPEGKTQYAYDKSGRLTGIFSPDGTSQRTGYDERG
RVNVTTQGRRAIEYHYPDEHTVIRCILPPEDERDRHPDESLLKTTYRYNAAGELTEVILP
GDETLTFSRDEAGREVFRHSNRGFACEQGWNAASQLVTQRAGFFPEETTWGGLLPSLVRE
YRYDSAGNVSGVTSREDYGRETRREYRLDRNGQVTAVTASGTGLGYGEGDESYGYDSCGY
LKAQSAGRHRISEETDQYAGGHRLKQAGNTQYDYDAAGRMVSRTKHRDGYRPETERFRWD
SRDQLTGYCSAQGELWEYRHDASGRRTEKRCDRKKIRFTYLWDGDSIAEIREYRDDKLYS
VRHLVFNSFELISQQFSRVRQPHPSVAPLWVTRTNHAVSDLTGRPLMLFNSEGKTVWRPG
QTSLWGLALSLPADTGYPDPRGELDPEAAPGLLYAGQWQDTESGLCYNRFRYYEPETGMY
LVSDPLGLQGGEQTYRYVPNPLGYVDPLGLAVCPKLYEIYKGLRAQGFNPAEARDLAKWF
NSSWGKADVYLRSAIGSGKIDYVGISRNVLNRYPQGKYDLELLTRLTGQLPRNQARAIEQ
AIINAKRGNGFTNIQNSIDPAKDHFDAAVKWGEEWLKSNGFGGWLQ
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaggaccaggcgggccacagggagcgaccgcaggcggtacgctggcaatgcga
atgctgtcacagcaggcgatggtcgccagccagatgaaacgggcagccaacgacaaagcc
attgcacagatgctggcagcaaagaagtccggcccacctgccgccaggctgggcgatgaa
attcagcataaaagttttctgggggcactggcaggggccgtgctgggggcgatagtgacc
atcgcagaaggttgcctgattatggccgcctgcgccaccggcccttatgcgctggttctg
gtgcctgcgctgatgtatgccagctataaggcgagtgattatgtggaggagaaacagaac
cagcttgagtcatggataaacagcttttgtgacacggacggcgccatcaataccggttct
gaaaacgtaaaaattaacggaaagcccgctgccagggccgccgtcacccttccccctcct
cccccacctggagcaatacctgaagtcccacagggggaaccctcatggggtgatattgcc
actgacctgcttgaatcggcagcggaaaaagcagtaccactggcgaaggcctgggggaac
gctgttatcaccctgacggacagcaatgccggttttatggatcgcgtcagcgccggcgca
tcgcttctgtttcccgccggtccggtattaatggagtttgccaccatggtgggcgggcgt
ggcgaaatcaaaaaagatgtggatttcccggaagccggtgaggacacggcgctctgcgac
aaggagaacaaaccaccgaggatagcccagggcagcagcaacgtctttatcaacaatcag
cctgccgcacgccagggcgacaaactggagtgcagcgcagcaatcgtgggaggttcgccg
gacgtctttattggcggtgagcaggtgacctatctggatatccagccggagttcccgccg
tggcagagaatgatcctggggggaataacgatagccagctatcttctgccgccagcggga
ctgctgggaaaactgaagaatctggcgagactcggcaaactggggaacctgctggggaaa
agcgggaagctgctgggggcaaagctcggcgcgtttctggggaaaacaggtaagtcgtta
aaaagtattgccaataaagtcatcagatgggtaacagatcctgtcgatccggtaaccggc
gcgtactgcgacgaacgtaccgacttcaccctgggccagacactccccctctccttcacc
cgtttccacagttctgtactgccgctgcatggcctgaccggcgtgggctggagcgactcc
tggagcgaatacgcctgggtgcgtgaacagggaaaccgggtggatatcatcacccaggga
gccacgctgagatttgccttcgacggtgacagtgatacggcggttaacccgtatcacgcc
cagtacattctgcgccgccgcgacgattacctggagctgttcgacagggatgcactgagc
agccgcttcttttatgacgcctttccgggaatgcgtctgcgccacccggtgactgacgat
accagcgatgaccgcctggcacacagccccggtgaccggatgtatatgctgggcgggatg
agtgacaccgccagcaaccgcatcacgtttgagcgcgacagccagtaccggatcacgggt
gtcagtcacaccgacgggatccggcttaaactgacgtaccatgccagcggctacctgaaa
gccattcaccgcacggataacggcatacagacgctggcgacctacgaacaggatgcgcgg
gggcggctgacagaagcggatgcgcggctggactaccacctgttttatgagtacgacgct
gcggaccggatcatccgctggtccgataacgaccagacgtggagccgtttcacctacgat
gaacagggccggtgcgtgaatgtcaccggggcggagggctattacaacgccacgctggac
tatggtgacggctgcaccaccgtgacggacggcaagggcattcaccgttattactatgat
cctgacggcaatattctgcgggaagaagcgccggacggcagcaccaccacgtatgaatgg
gatgaattccatcacctgctggcccgccactcccctgccgggcgggtggagaagtttgaa
tacaacgccgcactcggtcagttaagccgttacacggcggcagacggcgcggagtggcag
taccgctatgatgagcgcggcctgctcagcaacatcaccgaccctgccgggcagacgtgg
acacagcagtgtgatgaacgcggcctgccggtaagtctggtgtcgccacagggcgaagag
acccggctggcatacaccgctcaggggctgctgtcgggaatattccgccaggatgaacgg
cgtctgggcatagagtacgaccaccacaaccggccggaaacactcaccgacgtgatgggc
cgtgaacaccacaccgaatacagcggtcacgacctgccggtgaagatgcgcggccccggc
ggtcagtcagtgcggttacagtggcagcagcaccataaactgagcggcattgaacgtgct
ggaaccggcgcggaaggatttcgctatgaccgccacggcaacctgctggcgtacacggac
ggcaatggtgttgtctggacaatggagtacggcccgttcgatttgccggtggcgcgaacg
gacggtgaaggccaccgctggcagtaccgctacgataaagacacgctgcaactgacagaa
gtcattaacccgcagggcgaatcatacctttatgttctggataactgcggccgggtgacg
gaagagcgtgactggggcggcgtggtctggcgttaccgctatgacgccgatggcctgtgt
accgccagggttaacggcctggaggaaaccatcctctacagccgggatgccgcaggccgc
ctggcagaggtcatcacgccggaaggcaaaacacagtatgcgtatgacaaatccggcagg
ctgacgggtatcttcagcccggacggtacatcacagcgcaccggctatgacgaacgcggg
cgggtgaatgtcaccactcagggccgacgggccattgaataccactaccccgatgaacac
accgttatccgctgtatcctgccaccggaagatgaacgcgacagacaccccgatgaatcc
ctgctgaaaaccacgtaccgttataacgccgccggagaactgacggaggtcattctgccg
ggggatgagacgctgacgttcagccgtgatgaggcgggacgtgaagtgttccggcacagt
aaccggggttttgcctgtgagcagggctggaatgcagccagccagcttgtcacccagcgc
gccggatttttcccggaggaaaccacatggggcgggctgctcccctcactggtacgggag
taccgttacgacagcgcgggtaacgtgtcaggcgtcaccagccgggaagattacggacgg
gaaacacggcgggaataccggctggaccggaacggtcaggtcacggcggtgacagcctca
ggcaccgggctgggctatggcgaaggcgatgagtcctatggctatgacagttgtggctac
ctgaaggcgcagtctgcgggcaggcaccggataagtgaagagactgaccagtatgccgga
ggccaccggctgaaacaggccggaaacacgcagtatgactatgacgccgcaggccggatg
gtcagccggacaaaacaccgtgacggctaccgcccggaaacagagcggttccggtgggac
agccgggaccagctgaccgggtattgcagcgcacagggggagctgtgggaataccgccac
gacgccagcggcagacgaacagagaaacgctgcgaccggaagaaaatccgcttcacgtac
ctgtgggacggcgacagtattgcggaaatccgggaataccgcgatgataaactgtacagc
gtacggcacctggtgtttaacagctttgagctgataagccagcagttcagccgggtacgg
cagccgcatccgtccgtcgccccgctgtgggtgacgcggacgaatcatgcggtgagcgac
ctgacgggccgtccgctgatgctctttaacagtgaaggtaaaaccgtctggcgaccgggg
cagaccagcctgtgggggctggcactcagcctgcccgcagacaccggctacccggacccg
cgcggggaactggacccggaagccgcccccggcctgctgtatgcgggacagtggcaggat
acggaatccgggctgtgctataaccggttccggtattacgagccggaaaccggaatgtac
ctggtgagtgatccgctggggttgcaggggggtgagcagacttaccggtatgtgcctaat
ccgctggggtatgttgatccgttagggttggctgtatgtcctaaattgtatgaaatatac
aagggattaagagcacaaggatttaacccagcagaagctagagatctagcaaaatggttc
aatagtagctggggaaaggctgatgtatatcttcgttcagcaataggatcaggaaaaata
gattatgttggaataagtagaaatgtgcttaatcgttatccgcaaggtaaatatgatttg
gagttactcacaagactaacaggacaacttccgaggaatcaagcaagagcaatagaacaa
gctatcattaatgctaaaagaggaaacggcttcacaaatatccagaatagtatagatcct
gctaaagatcattttgatgcagcggtaaaatggggtgaggagtggttaaagagtaatgga
tttggtggatggctgcaataa
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