Escherichia coli LY180: LY180_03825
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Entry
LY180_03825 CDS
T02846
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
ecol
Escherichia coli LY180
Pathway
ecol00020
Citrate cycle (TCA cycle)
ecol00190
Oxidative phosphorylation
ecol00650
Butanoate metabolism
ecol00720
Other carbon fixation pathways
ecol01100
Metabolic pathways
ecol01110
Biosynthesis of secondary metabolites
ecol01120
Microbial metabolism in diverse environments
ecol01200
Carbon metabolism
Module
ecol_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ecol_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ecol_M00149
Succinate dehydrogenase, prokaryotes
ecol_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ecol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LY180_03825 (sdhB)
00650 Butanoate metabolism
LY180_03825 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
LY180_03825 (sdhB)
00720 Other carbon fixation pathways
LY180_03825 (sdhB)
Enzymes [BR:
ecol01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LY180_03825 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_9
Fer4_18
Fer4
Motif
Other DBs
NCBI-GeneID:
16978438
NCBI-ProteinID:
AGW08112
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All DBs
Position
817673..818389
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AA seq
238 aa
AA seq
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MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVC
GSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPY
LLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYR
FLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagactcgagttttcaatttatcgctataacccggatgttgatgatgctccgcgtatg
caggattacaccctggaagcggaagaaggtcgcgacatgatgctgctggatgcgcttatc
cagctgaaagagaaagatcccagcctgtcgttccgccgctcctgccgtgaaggtgtgtgc
ggttccgacggtctgaacatgaacggcaagaatggtctggcctgtattaccccgatttcg
gcactcaaccagccgggcaagaagattgtgattcgcccgctgccaggtttaccggtgatc
cgcgatttggtggtagacatgggacaattctatgcgcaatatgagaaaattaagccttac
ctgttgaataatggacaaaatccgccagctcgcgagcatttacagatgccagagcagcgc
gaaaaactcgacgggctgtatgaatgtattctctgcgcatgttgttcaacctcttgtccg
tctttctggtggaatcccgataagtttatcggcccggcaggcttgttagcggcatatcgt
ttcctgatcgatagccgtgataccgagactgacagccgcctcgacggtttgagcgatgca
ttcagtgtattccgctgtcacagcatcatgaactgcgtcagtgtatgtccgaaggggctg
aacccgacgcgcgccatcggccatatcaagtcgatgttgttgcaacgtaatgcgtaa
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