Escherichia coli LY180: LY180_05025
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Entry
LY180_05025 CDS
T02846
Name
(GenBank) membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ecol
Escherichia coli LY180
Brite
KEGG Orthology (KO) [BR:
ecol00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecol02000
]
LY180_05025
Transporters [BR:
ecol02000
]
Other transporters
Pores ion channels [TC:
1
]
LY180_05025
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF2490
Motif
Other DBs
NCBI-GeneID:
16978678
NCBI-ProteinID:
AGW08334
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All DBs
Position
complement(1080244..1081284)
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AA seq
346 aa
AA seq
DB search
MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFINNNGPTHENQLGAGA
FGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGG
MVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDAHTIGTRPDN
GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ
LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM
GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIKDVVTQPQA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacagctatcgcgattgcagtggcactggctggtttcgctaccgtagcgcag
gccgctccgaaagataacacctggtacactggtgctaaactgggctggtcccagtaccat
gacactggtttcatcaacaacaatggcccgacccatgaaaaccaactgggcgctggtgct
tttggtggttaccaggttaacccgtatgttggctttgaaatgggttacgactggttaggt
cgtatgccgtacaaaggcagcgttgaaaacggtgcatacaaagctcagggcgttcaactg
accgctaaactgggttacccaatcactgacgacctggacatctacactcgtctgggtggt
atggtatggcgtgcagacactaaatccaacgtttatggtaaaaaccacgacaccggcgtt
tctccggtcttcgctggcggtgttgagtacgcgatcactcctgaaatcgctacccgtctg
gaataccagtggaccaacaacatcggtgacgcacacaccatcggcactcgtccggacaac
ggcatgctgagcctgggtgtttcctaccgtttcggtcagggcgaagcagctccagtagtt
gctccggctccagctccggcaccggaagtacagaccaagcacttcactctgaagtctgac
gttctgttcaacttcaacaaagcaaccctgaaaccggaaggtcaggctgctctggatcag
ctgtacagccagctgagcaacctggatccgaaagacggttccgtagttgttctgggttac
accgaccgcatcggttctgacgcttacaaccagggtctgtccgagcgccgtgctcagtct
gttgttgattacctgatctccaaaggtatcccggcagacaagatctccgcacgtggtatg
ggcgaatccaacccggttactggcaacacctgtgacaacgtgaaacagcgtgctgcactg
atcgactgcctggctccggatcgtcgcgtagagatcgaagttaaaggtatcaaagacgtt
gtaactcagccgcaagcttaa
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