Escherichia coli LY180: LY180_13405
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Entry
LY180_13405 CDS
T02846
Name
(GenBank) recombinase
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
ecol
Escherichia coli LY180
Brite
KEGG Orthology (KO) [BR:
ecol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecol03400
]
LY180_13405
DNA repair and recombination proteins [BR:
ecol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LY180_13405
TLS (translesion DNA synthesis) factors
Other SOS response factors
LY180_13405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_15
AAA_21
AAA_22
NTPase_P4
DUF2161
Motif
Other DBs
NCBI-GeneID:
16980351
NCBI-ProteinID:
AGW09790
LinkDB
All DBs
Position
2826767..2828428
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AA seq
553 aa
AA seq
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MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAA
RADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLREL
GQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMTARYQLWHQSCRDLAHHQQLS
QERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMADGEDA
NLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQIAEASDELRHYCDRLDLDPNRLFE
LEQRISKQISLARKHHVSPEALPQYYQSLLEEQQQLDDQADSQETLALAVTKHHQQALEI
ARALHQQRQQYAEELAQLITDSMHALSMPHGQFTIDVKFDEHHLGADGADRIEFRVTTNP
GQPMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL
GESTQVMCVTHLPQVAGCGHQHYFVSKETDGAMTETHMQSLNKKARLQELARLLGGSEVT
RNTLANAKELLAA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgttggcacaactgaccatcagcaactttgctatcgttcgtgagcttgagattgatttt
catagcggcatgaccgtaataactggcgagaccggcgcgggtaaatctattgcaatagat
gccctcggtctttgtctcggtggtcgcgctgaagccgacatggtgcgtaccggcgctgct
cgcgctgacctgtgcgcccgtttttctctgaaagatacgccagcggctctgcgctggctg
gaagaaaaccagcttgaagacgggcatgaatgtttgcttcgtcgcgtgatcagcagcgat
ggtcgctcccgtggtttcatcaacggtacagctgttcctctgtcacaactgcgcgaactg
ggtcagttgctgattcagatccatggtcagcacgctcatcagttactcaccaaacccgag
caccaaaagttcctgcttgatggctatgccaatgaaacctctctactccaggaaatgaca
gcacgttatcagttgtggcatcaaagctgccgtgacctcgcgcatcatcaacagttaagt
caggaacgcgctgcccgtgcggaactgctgcaataccaattaaaagaacttaacgaattt
aatccgcagcccggagagtttgaacaaatcgacgaagagtacaaacgtctggcgaacagc
ggtcaattgctgaccaccagccagaatgcattggcattaatggccgacggtgaagacgca
aacctgcaaagtcagctttacacggctaaacaactggtgagcgaattgattggcatggac
agcaaactgtccggcgtacttgatatgctggaagaagctaccatccagattgctgaagcc
agcgatgaactgcgccactactgcgatcgtctggatctcgatcccaaccgactatttgaa
cttgaacagcgcatctcaaaacagatttcgctggcacgtaaacatcacgtcagccctgag
gcattgccacagtattaccagtcgctactggaagaacagcagcaactggacgatcaggcc
gactcacaagaaacgctcgcgctggcggtaacgaaacatcatcagcaggcactggaaatc
gcgcgcgcattacaccaacaacgccagcaatatgcagaagaacttgcacagctgatcacc
gacagtatgcatgcgctctcaatgccgcatgggcagtttacgatcgatgttaaatttgac
gagcatcacctgggcgctgacggtgccgatcgtattgagtttcgggtaaccaccaaccca
ggtcagccaatgcagcctattgccaaagtcgcatccggtggtgaattgtcccgcatcgca
ctggcaatccaggtcatcacggcgcgtaaaatggaaaccccggcactgatttttgatgaa
gtggatgtagggattagcggtccaacagcggcagttgtcggcaaactgctgcgtcaactc
ggcgaatcaactcaggtgatgtgtgttacccacctgccacaagtcgcgggatgtggtcat
caacactattttgtcagcaaagaaaccgatggtgcgatgacagaaacgcatatgcaatcc
ctgaataaaaaagcgcggttacaagagctggcgcgcctgcttggtggcagtgaagtcaca
cgtaatacactggcgaatgcgaaagaactgcttgcagcgtaa
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