KEGG   Escherichia coli LY180: LY180_15910
Entry
LY180_15910       CDS       T02846                                 
Name
(GenBank) XRE family transcriptional regulator
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
ecol  Escherichia coli LY180
Brite
KEGG Orthology (KO) [BR:ecol00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecol03000]
    LY180_15910
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ecol02048]
    LY180_15910
Transcription factors [BR:ecol03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    LY180_15910
Prokaryotic defense system [BR:ecol02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    LY180_15910
SSDB
Motif
Pfam: HTH_3 HrpB2 HTH_31
Other DBs
NCBI-GeneID: 16980852
NCBI-ProteinID: AGW10190
LinkDB
Position
complement(3353825..3354241)
AA seq 138 aa
MIAIADILQAGEKLTAVAPFLAGIQNEEQYAQALELVDHLLLNDPENPLLDLVCAKITAW
EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE
HAKKLATRFGISPALFID
NT seq 417 nt   +upstreamnt  +downstreamnt
atgattgcgattgccgacatcttgcaagcaggagaaaagctaactgcggtggcacctttt
ctggcgggtattcagaacgaggaacaatacgcccaggcgctggaactggtagatcatctg
ctgctcaacgatcctgaaaaccccttgctggatctggtgtgtgccaaaataaccgcgtgg
gaagaatcagcgcccgaatttgcggaatttaatgccatggctcaagccatgcctggcggt
atagccgtgattcgtacccttatggatcaatatggtttaaccctttccgatctgccggaa
attggcagtaaatctatggtgtcacgcgttttgagcgggaagaggaaattaacgctggaa
cacgctaaaaaattggcaacgcgattcggcatttctcccgccttgtttattgattaa

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