Escherichia coli LY180: LY180_17220
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Entry
LY180_17220 CDS
T02846
Name
(GenBank) transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ecol
Escherichia coli LY180
Pathway
ecol02020
Two-component system
ecol02024
Quorum sensing
ecol02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LY180_17220
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LY180_17220
02026 Biofilm formation - Escherichia coli
LY180_17220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecol03000
]
LY180_17220
Transcription factors [BR:
ecol03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
LY180_17220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
RepL
MarR
HTH_24
HTH_23
MarR_2
Sigma70_r4
HTH_36
HTH_11
HTH_7
Motif
Other DBs
NCBI-GeneID:
16981114
NCBI-ProteinID:
AGW10428
LinkDB
All DBs
Position
3592729..3593361
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AA seq
210 aa
AA seq
DB search
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEM
ILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQ
MARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS
RETVGRILKMLEDQNLISAHGKTIVVYGTR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttggcaaaccgcaaacagacccgactctcgaatggttcttgtctcattgccac
attcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctg
tactacatcgttaaaggctctgtggcagtgctgatcaaagacgaagagggtaaagaaatg
atcctctcctatctgaatcagggtgattttattggcgaactgggcctgtttgaagagggc
caggaacgtagcgcatgggtacgtgcgaaaaccgcctgtgaagtggctgaaatttcgtac
aaaaaatttcgccaattgattcaggtaaacccggacattctgatgcgtctgtctgcacag
atggcgcgtcgtctgcaagtcacttcagagaaagtgggcaacctggcgttcctcgacgtg
acgggccgcattgcacagactctgctgaacctggcaaaacaaccagatgctatgactcac
ccggacggtatgcaaatcaaaattacccgtcaggaaatcggtcagattgtcggctgttct
cgtgaaaccgtgggacgcattctgaagatgctggaagatcagaacctgatctccgcacac
ggtaaaaccatcgtcgtttacggcactcgttaa
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