Escherichia coli LY180: LY180_18070
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Entry
LY180_18070 CDS
T02846
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K21086
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ecol
Escherichia coli LY180
Pathway
ecol02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecol00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
LY180_18070
Enzymes [BR:
ecol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LY180_18070
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Gene cluster
GFIT
Motif
Pfam:
EAL
Methyltransf_23
Motif
Other DBs
NCBI-GeneID:
16981284
NCBI-ProteinID:
AGW10580
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Position
complement(3784336..3785103)
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AA seq
255 aa
AA seq
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MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS
QRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKI
LRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKI
ARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS
RPAPIETLNTAVLAL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgataaggcaggttatccagcgaataagcaaccctgaagcaagcatcgagagcttgcag
gaacggcgtttttggttgcagtgtgagcgtgcttacacctggcagccgatctatcaaaca
tgcgggcggttaatggccgtggagctattaacggtggtcacgcatcccttgaacccttcg
caacgcctgccgccggatcgctattttactgaaatcaccgtcagccatcggatggaggtt
gtgaaagagcagattgatttgttggcgcaaaaagccgacttctttatagagcacggcctg
ctggcatcggtcaatattgatggccctacgctcatcgccctgcgtcagcaaccaaaaatc
ctgcgccagattgagcgtcttccctggctgcgtttcgaactggtggaacacatccgcctg
ccgaaagattcaacctttgcctcgatgtgtgaatttggcccgctgtggctggatgatttt
ggcaccgggatggcaaatttctctgcgctaagtgaagtgcgttatgactacatcaaaatc
gcgcgagagctgttcgtgatgctgcgtcagtcgccggaaggccgcacactcttttctcag
cttttacatctaatgaatcgctattgtcgcggggtgattgtcgagggcgtagaaacaccg
gaagagtggcgtgatgttcagaactcgcccgcattcgccgcacaaggctggtttctttca
cgcccggcaccgatagaaacgctgaatacggcggttctggcgctataa
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