Escherichia coli LY180: LY180_21855
Help
Entry
LY180_21855 CDS
T02846
Name
(GenBank) mechanosensitive channel protein
KO
K22051
miniconductance mechanosensitive channel
Organism
ecol
Escherichia coli LY180
Brite
KEGG Orthology (KO) [BR:
ecol00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecol02000
]
LY180_21855
Transporters [BR:
ecol02000
]
Other transporters
Pores ion channels [TC:
1
]
LY180_21855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-GeneID:
16982036
NCBI-ProteinID:
AGW11200
LinkDB
All DBs
Position
complement(4577959..4581282)
Genome browser
AA seq
1107 aa
AA seq
DB search
MRLIITFLMAWCLSWGAYAATAPDSKQITQELEQAKAAKPAQPEVVEALQSALNALEERK
GSLERIKQYQQVIDNYPKLSATLRAQLNNMRDEPRSVSPGMSTDALNQEILQVSSQLLDK
SRQAQQEQERAREIADSLNQLPQQQTDARRQLNEIERRLGTLTGNTPLNQAQNFALQSDS
ARLKALVDELELAQLSANNRQELARLRSELAEKESQQLDAYLQALRNQLNSQRQLEAERA
LESTELLAENSADLPKDIVAQFKINRELSAALNQQAQRMDLVASQQRQAASQTLQVRQAL
NTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQQLDTEMAQLRVQRLRYEDLLNKQPLL
RQIHQADGQPLTAEQNRILEAQLRTQRELLNSLLQGGDTLLLELTKLKVSNGQLEDALKE
VNEATHRYLFWTSDVRPMTIAWPLEIAQDLRRLISLDTFSQLGKASVMMLTSKETILPLF
GALILVGCSIYSRRYFTRFLERSAAKVGKVTQDHFWLTLRTLFWSILVASPLPVLWMTLG
YGLREAWPYPLAVAIGDGVTATVPLLWVVMICATFARPNGLFIAHFGWPRERVSRGMRYY
LMSIGLIVPLIMALMMFDNLDDREFSGSLGRLCFILICGALAVVTLSLKKAGIPLYLNKE
GSGDNITNHMLWNMMIGAPLVAILASAVGYLATAQALLARLETSVAIWFLLLVVYHVIRR
WMLIQRRRLAFDRAKHRRAEMLAQRARGEEEAHHHSSPEGAIEVDESEVDLDAISAQSLR
LVRSILMLIALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILV
FIITTQLVRNLPALLELAILQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKL
QWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTIS
DWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTEILLTAARRCSLV
IDNPAPEVFLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHAHGIDMPFPPFQ
MRLESLNGKQTGRTLTSAGKGRQAGSL
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgattatcacttttctgatggcctggtgcctcagttggggggcgtacgccgcg
acggcccccgatagcaaacaaatcactcaggaactggagcaggcaaaagcggcgaaaccc
gcacagccggaagtcgtagaggcgctccagtctgccttaaatgcgcttgaggaacgaaaa
ggttcccttgagcgcatcaaacaatatcagcaagttatcgataattatccgaaactctcc
gctactctgcgcgcacaattaaacaacatgcgtgacgagccgcgcagcgtgtcgccggga
atgtctaccgacgcgctgaatcaggaaattctccaggtcagcagccagttgctggataaa
agccgtcaggcccagcaagagcaggagcgcgcccgcgagattgccgattcgctgaatcaa
ctgccgcaacagcaaaccgacgcccgccgtcagttaaatgagatcgagcgccgcctggga
acgcttaccggcaatactccgctcaatcaggcacaaaatttcgcgttgcagtctgactct
gcacgtcttaaggcgctcgttgatgaactggagctggcgcagctgtctgccaataaccgc
caggaattagcgcgcttacgctcagagctggcggaaaaagagagccagcaactggatgcg
tatttgcaggccttgcgtaatcaattaaacagccaacgtcagcttgaggcggagcgggcg
ctggaaagtaccgaattgctggcagaaaacagcgccgatttgccgaaagatatcgtcgcg
caattcaaaattaaccgcgaactatcggcggctttgaatcaacaggcgcagcggatggat
ctcgttgcctcgcaacagcgtcaggctgccagccagacgttacaggtccggcaggcgttg
aatacgctgcgtgaacagtcgcaatggctgggatcgtccaatctgctcggcgaagcgctg
cgggcgcaggtggcacggctgccggaaatgccgaaaccacaacagcttgataccgaaatg
gcgcagttgcgtgtgcaacggttacgttatgaggatctgcttaataaacagccgctgcta
cggcaaattcatcaggccgacggtcagccgctgactgccgagcaaaaccgtattctggaa
gcacaactgcgcactcagcgtgagttgctgaactcattgttgcagggtggcgacacgcta
ctattggaactgaccaagctgaaagtctccaacgggcaactggaggatgcgctgaaagag
gtgaacgaagcaacgcaccgctatctgttctggacctctgacgtgcgcccgatgaccatc
gcctggccgctggaaatcgcccaggatctgcgtcgtctcatttcgctggacaccttcagt
cagttgggcaaagccagtgtgatgatgctgaccagcaaagagacaattttgccgctgttt
ggcgcgttgattctggtcggttgcagtatttactcgcgccgctatttcacccgttttctt
gaacgttcggcggcgaaagttggcaaagtgactcaggatcacttctggctgacgttgcgc
actcttttctggtcgattctcgtcgcgtcaccgttaccggtgctgtggatgacgctgggt
tacggcttgcgcgaggcgtggccttatccgctggcggtcgcgattggcgatggtgtaacg
gccaccgtgccgctgctgtgggtagtgatgatttgcgccacctttgcccgcccgaacggc
ttgtttatcgctcattttggctggccgcgcgaacgtgtttcccgtgggatgcgctactac
ctgatgagcatcgggcttattgtgccgctgattatggcgctgatgatgttcgataacctc
gacgaccgtgaattctccggttcgctgggacggctttgctttatcctcatttgcggtgcg
ctggcggtggtcaccctcagcctgaaaaaggccgggattccgctgtatctcaacaaagag
ggcagcggcgacaacattaccaaccatatgctgtggaacatgatgattggcgcgccgttg
gttgccattctggcgtcggcggtgggttatctggcaacggcacaggcgctgttagcgagg
cttgaaacctcggttgccatctggttcctgctactggtggtttatcacgttatccgccgc
tggatgctgatccagcgccgcaggctggcgtttgatcgggcgaagcatcgccgggcagag
atgttagcgcaacgtgcgcgtggcgaagaggaagcgcatcatcacagtagcccggaagga
gcaattgaagtcgatgaaagcgaagtcgatctcgatgccatcagtgcgcaatccttgcgg
ctggtgcgctcaattttgatgttgatcgccctgctttctgtcattgtgctgtggtcagaa
atccattccgctttcggcttcctcgaaaatatttcgctgtgggatgtcacctccacggta
cagggcgtagaaagtctggagccaattaccctcggtgcggtgctgattgccattctggtg
tttatcatcaccacgcagctggtgcgcaacttgcccgcgctgctggaactggcgattttg
cagcacctggatttaacgccgggtacgggttacgccatcaccaccatcaccaaatatctg
ctgatgctgattggcgggctggtcggcttctcaatgattggtattgagtggtcgaaattg
cagtggctggttgccgcgctcggtgttggtctcggttttggtttgcaggaaattttcgcc
aactttatctctggtctgattatcctgttcgaaaaaccgattcgcattggcgatacggtg
acaattcgcgatctcaccggtagcgtgacgaaaattaacacccgcgccaccaccatcagc
gactgggaccgtaaagagataatcgtgccgaacaaggcgtttattaccgagcagtttatc
aactggtcgctctctgactcggtcacgcgcgtggtgttgacgataccggcccctgccgat
gccaatagcgaagaagtgacggaaatcctgctcaccgcagcgcgtcgctgctcgctggtg
atcgacaacccggcaccggaagtcttcctggtggatctgcaacaggggattcagattttc
gagctgcgtatttacgccgctgagatgggtcaccgtatgccgctacgccatgagatccac
cagctgattctggctggcttccatgcccacggtatcgatatgccattcccgcccttccag
atgcgtctggaaagcctcaacggtaaacaaacggggagaacgctgacgtctgcgggcaaa
ggtcgtcaggcgggaagtttgtaa
DBGET
integrated database retrieval system
