Escherichia coli LY180: LY180_21870
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Entry
LY180_21870 CDS
T02846
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ecol
Escherichia coli LY180
Pathway
ecol03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecol00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LY180_21870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecol03019
]
LY180_21870
03009 Ribosome biogenesis [BR:
ecol03009
]
LY180_21870
Messenger RNA biogenesis [BR:
ecol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LY180_21870
Ribosome biogenesis [BR:
ecol03009
]
Eukaryotic type
Pre-60S particles
RNases
LY180_21870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
16982039
NCBI-ProteinID:
AGW11203
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All DBs
Position
4583516..4584061
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AA seq
181 aa
AA seq
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MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD
WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaatgaaaacaacctgatttggatcgatcttgagatgaccggtctggatccc
gagcgcgatcgcattattgagattgccacgctggtgaccgatgccaacctgaatattctg
gcagaagggccgaccattgcagtacaccagtctgatgaacagctggcgctgatggatgac
tggaacgtgcgcacccataccgccagcgggctggtagagcgcgtgaaagcgagcacgatg
ggcgatcgggaagctgaactggcaacgctcgaatttttaaaacagtgggtgcctgcggga
aaatcgccgatttgcggtaacagcatcggtcaggaccgtcgtttcctgtttaaatacatg
ccggagctggaagcctacttccactaccgttatctcgatgtcagcaccctgaaagagctg
gcgcgccgctggaagccggaaattctggatggttttaccaagcaggggacgcatcaggcg
atggatgatatccgtgaatcggtggcggagctggcttactaccgcgagcattttatcaag
ctgtaa
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