Candidatus Electrothrix communis: QTN59_00800
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Entry
QTN59_00800 CDS
T09821
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ecom
Candidatus Electrothrix communis
Pathway
ecom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QTN59_00800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecom03019
]
QTN59_00800
03400 DNA repair and recombination proteins [BR:
ecom03400
]
QTN59_00800
Enzymes [BR:
ecom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QTN59_00800
Messenger RNA biogenesis [BR:
ecom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QTN59_00800
DNA repair and recombination proteins [BR:
ecom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QTN59_00800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
SelB-wing_3
ResIII
Motif
Other DBs
NCBI-ProteinID:
WLE97378
LinkDB
All DBs
Position
203927..205885
Genome browser
AA seq
652 aa
AA seq
DB search
MTILTSMTSTSEETLQQIFGFEAFLQGQEAVITAVLAGRSALAIFPTGQGKSLCYQLPAL
HLPGLTLVVSPLMALMKDQVDFLIGKGIAAARLDSSLDFSEVNAIYDRLHRNELKLLYVA
PERFANERFVALVARLRLSLLVIDEAHCISEWGHNFRPDYLKLAELVKTFAVPAVLGLTA
TATPKVAADIRQSFAVADADCIQTGFYRPNLTLLFEPAEDPDQALVDRLRELEEPDVVGG
PTIVYVTLQQTAMQVAALLAKEGFPAKPYHAGMKDEQRQAVQDWFMASDKAIVVATIAFG
MGIDKSNIRAVFHYNLPKSLENYAQEIGRAGRDGLPSTCIMLGNGNDLHVLENFVYGDTP
EPGHVPEFVDHILGQEAVFSCSIYELSGLFDMRPLVVKTLLTYLELEGLLASTGPFYSSY
SFKPLRPSAEILPRFDAERQEFLRKILSCAVKQKIWFSIDLDEAAQRTGSPRKRVITALD
YLEQQGDLVLKVSGARLGFRKLAADHLDIAVLKDGLVKRFAQRERSDLDRLGLVVDLVNQ
AGCKTGFLLRYFGEEPADACGHCSFCLHGENAQISGRASDAGVPEQKELAEALQQLRAEY
PQVLASPRQITRLLCGLSSPGLTRNKLSKHELFGKLDKYPFAEVMEWVGGTL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaccatattgacgagtatgacaagtacgtccgaagaaaccctgcaacagatcttcggc
tttgaagcctttctgcaggggcaggaagcggtgattacagctgttttggcgggccgctct
gccttggcgatttttcccaccggtcagggaaagagcctctgttatcaactgccagccttg
catcttcccggcctgaccttggtggtgtcgccgctcatggctctgatgaaggatcaggtg
gattttcttatcggaaaagggattgcagctgcacgcttggattcatccttagattttagc
gaagtcaacgcgatttatgaccggttgcaccgtaatgagctgaagctgctctatgtggct
ccagagcgctttgccaatgagcgctttgtggccttggttgcccggctacgactttctcta
ctggtgattgacgaggcccattgtatctccgaatggggccataatttccgtcctgactac
ctcaaactggcagaactggtcaaaacctttgccgtgcctgcggtgctgggcctgaccgcg
acagcaacgcccaaggtggcagcggatatccgacagagctttgctgttgctgacgctgac
tgcatccaaaccggattctatcgacccaacctcaccctgctctttgaaccggctgaagat
ccagatcaggctttggtggatcgactcagggagctggaggaaccggacgtggtaggcgga
ccgaccatcgtctatgtcaccctccagcagaccgccatgcaggtggccgctctgcttgcc
aaggagggatttccggccaaaccctatcatgccggaatgaaggatgagcaacggcaggcg
gtccaggattggtttatggcctcggataaggcgattgtggtggcgaccatcgcctttggt
atgggtattgataagagcaatatccgtgcagtctttcattataacctacccaagagcctg
gaaaattatgcccaggaaatcgggagggcaggacgggacggtctgccttcaacctgtatt
atgctcggcaacggcaatgacctgcatgtgctggagaattttgtctacggcgatactcca
gagcccggccatgtgccggagtttgtcgatcatattctcgggcaggaggctgtgttttct
tgctcgatttatgaactctccggcctgtttgatatgcgaccgttggtggtgaaaaccctg
cttacctatctggagcttgaggggctgcttgcatccaccgggccgttttacagcagctac
tcctttaagcccttacgaccttctgcggagattcttccccgctttgatgcggaacgacag
gagtttcttagaaaaattctttcctgcgcagttaagcagaagatctggttcagcattgat
cttgacgaggcagcgcaacggacgggcagtccgaggaaacgggtgatcacagccttggat
tatctggaacagcagggtgatctggtgctcaaggttagcggagcgcgtctcggtttcaga
aagcttgctgctgatcatcttgatattgcggtgctcaaggatgggctggtcaagcggttt
gcgcagcgggagcgcagtgacttggatcggctgggactggtggttgatctggtcaatcaa
gcagggtgcaagaccgggttcctgctgcgatattttggtgaggaaccagcggatgcctgc
ggccattgctcgttctgtctgcacggggagaatgcgcagataagcggcagggcgagcgat
gcgggggtgccggagcaaaaggagctggcggaagcgttgcaacagttacgagcggaatat
ccgcaggtcttggcaagcccgcgccagattacgcgcctgctctgtgggctttcatcaccc
ggtttgaccaggaataagttgagcaagcatgaactatttgggaagttggacaagtatcct
tttgcagaggtcatggagtgggttggcggcactctgtga
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