Candidatus Electrothrix communis: QTN59_05160
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Entry
QTN59_05160 CDS
T09821
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ecom
Candidatus Electrothrix communis
Pathway
ecom00521
Streptomycin biosynthesis
ecom00523
Polyketide sugar unit biosynthesis
ecom00525
Acarbose and validamycin biosynthesis
ecom00541
Biosynthesis of various nucleotide sugars
ecom01100
Metabolic pathways
ecom01110
Biosynthesis of secondary metabolites
ecom01250
Biosynthesis of nucleotide sugars
Module
ecom_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ecom00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QTN59_05160 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QTN59_05160 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
QTN59_05160 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QTN59_05160 (rfbB)
00525 Acarbose and validamycin biosynthesis
QTN59_05160 (rfbB)
Enzymes [BR:
ecom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
QTN59_05160 (rfbB)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
adh_short
NmrA
Motif
Other DBs
NCBI-ProteinID:
WLE98221
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All DBs
Position
1186107..1187189
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AA seq
360 aa
AA seq
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MKKKNMAKTVLVTGGCGFIGANFVRLILETRQDWRVINLDKLTYAGNLHNLEDVSGHPNY
RFVRGDICDQTLLDNLFSEEQIDTVVHFAAESHVDRSITGPAEFIRTNITGTFTLLEAAK
KQWLDNGQKNDQCRFLHVSTDEVYGSLGATGFFTEQTSYDPRSPYSASKASSDHLVRAYF
HTYGLPILITNCSNNYGPYQFPEKLIPLVLNNGMQGKELPVYGDGGNVRDWLYVQDHCEA
IVQVVEQGRRGEAYNIGGHNEKNNLQVVELLCDMLDKKLGLLPSGKARRSLITFVKDRLG
HDRRYAIDADKIDQELGWTPKYTFEQGIEKTVTWYLDNQEWMESVMDGSYQEYYAKMYGK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaagaacatggctaaaacagtactagttacagggggctgtggctttatcggc
gcaaactttgttcgcctcatccttgagacacgccaggactggcgagttattaatctcgac
aaattgacctatgccggaaatctgcataaccttgaggacgtaagcggacaccccaactat
cgttttgtccgaggtgacatctgcgaccaaacccttttggacaacctcttttcggaagag
cagattgatacggtggttcattttgctgccgagtcccatgttgatcgctccataaccggg
ccagccgaattcatccgaacgaatatcaccggtacttttaccctgcttgaggcggccaaa
aagcaatggttggataacgggcaaaaaaatgatcaatgccgctttctccacgtgagcacg
gatgaggtctatggctccctgggagcaaccggttttttcacagaacaaacctcgtatgat
ccccgctcaccctattccgcttccaaagcatcctcggatcatctggtgcgggcctatttc
cacacctatggcctacctattctgattaccaactgttctaataattatggtccttatcaa
ttccctgagaaattgattcccttggtgctcaataacggcatgcagggaaaagaactcccg
gtctacggggacgggggcaatgtgcgcgactggctctatgtgcaggaccattgtgaagcc
attgtccaagtcgtggagcaaggaagacgaggagaggcctataatatcggcgggcataac
gaaaaaaataatctccaggttgtagagctcctctgcgatatgctcgataaaaagctcggc
ctgcttccttctggcaaagcaaggcgttctttaatcacctttgtaaaagaccgccttggt
catgatcgtcgctatgccatcgatgcggataaaattgatcaggagctcggatggacacca
aaatacacctttgaacagggaattgaaaaaaccgtcacttggtatctcgataatcaggaa
tggatggaatcagttatggatggttcctaccaggaatactatgcaaagatgtacggtaaa
taa
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