Candidatus Electrothrix communis: QTN59_06690
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Entry
QTN59_06690 CDS
T09821
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
ecom
Candidatus Electrothrix communis
Pathway
ecom02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ecom00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QTN59_06690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ecom02022
]
QTN59_06690
02035 Bacterial motility proteins [BR:
ecom02035
]
QTN59_06690
Two-component system [BR:
ecom02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
QTN59_06690
Bacterial motility proteins [BR:
ecom02035
]
Pilus system
Twitching motility proteins
QTN59_06690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
bpMoxR
AAA_2
nSTAND6
AAA_7
FleQ
AAA_3
PDE8A_N
AAA_22
HEAT_GCN1
Motif
Other DBs
NCBI-ProteinID:
WLE98519
LinkDB
All DBs
Position
complement(1546580..1547941)
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AA seq
453 aa
AA seq
DB search
MPRILIVDDELSMRDFLKILFENEGYEVSVAANAATALDVAVKDPFDVVITDIRMPGMNG
LELLAELKQHFPDLPVIMITAYASPDDAVQAMRQGAFDYITKPFHVDELKNVIRTAVQRK
ASAEKNEAGESFAGIIGSSPEMLRIFDLIRRVAPTPASVLIYGESGTGKELVAKAIHEHS
KVVGNSFVPITCSAIPESLLESELFGHVKGSFTGAVADKPGLFQQADSGTAFLDEIGELT
PIIQTKLLRVLQEREFMPVGSTKTKQVNVRIISATNRNLEDEIMEKRFREDLFYRLAVVP
IRVPPLRERKGDVPLLVDYFLKKYSELFGKEIQTISSYGLEVLMDYNFPGNVRELENIIE
RGVALEASNIILPESLILSRKEKVGSQKEPLFVGAQDERELFDRGMEDILIDLETRMIRH
ALDAAEGSKMRAAELLKVSFRSLRYKTKKYEID
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtattcttattgtagatgacgagttaagtatgcgtgattttctcaaaattttg
tttgagaatgagggctacgaagtttctgtcgcggcgaatgctgccacggcgttggacgtt
gctgtgaaagatccgtttgatgttgttattacggacattcgtatgcccggcatgaacggc
cttgaactgctggcagagttaaaacagcattttcccgatttgccggtgattatgatcact
gcgtatgcctcgcccgatgatgctgtgcaggcaatgaggcagggtgcctttgattatatt
accaagccgtttcatgttgatgagctgaagaatgttatcagaacggcggttcaacgcaag
gcatcagcggagaagaatgaggcaggggaaagctttgcaggaatcatcggttctagcccg
gaaatgttgcgaatttttgatctaatccgacgagtagctcctaccccagctagtgtgctt
atctatggtgaatccggaaccgggaaggaactggttgccaaggccattcatgagcattcc
aaggttgttggaaattcttttgttccgatcacatgcagtgcaataccggaaagtctcctt
gaaagcgaactcttcggccatgtcaaaggctcctttacaggcgctgtggctgataaacct
gggctttttcagcaggctgattcaggcacggcctttcttgatgaaatcggcgagcttacg
ccgataatccagaccaagctcttacgggtgcttcaggagcgtgagttcatgccggtgggg
tcgacaaagacaaagcaggttaatgtccgcatcatttctgcaaccaatcggaatctggaa
gacgagatcatggagaaacgcttccgagaggatctcttctaccgtctggctgttgtaccg
attcgggtaccaccgctcagagagcgcaaaggggatgttcctttgctggtagattatttc
ctgaaaaaatattccgaactgttcggcaaagaaatacaaaccatttcttcatacggtctg
gaagttctgatggactacaacttcccaggcaatgtgcgggaacttgaaaacatcattgag
cgcggggtggcccttgaagcctctaatattattcttccagaaagccttatactttcccgg
aaggagaaagtaggttcacagaaagaacctttatttgtcggggcccaagatgagcgggaa
ctgtttgaccgggggatggaggatatcttgatcgacttggaaaccagaatgatcaggcat
gcgcttgacgcagcagaaggctcaaaaatgcgggctgctgaactgctgaaggtcagtttt
agatctctgcgttataaaacgaaaaaatacgagattgattga
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