Candidatus Electrothrix communis: QTN59_08555
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Entry
QTN59_08555 CDS
T09821
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ecom
Candidatus Electrothrix communis
Pathway
ecom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QTN59_08555 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecom03019
]
QTN59_08555 (rny)
Messenger RNA biogenesis [BR:
ecom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QTN59_08555 (rny)
BRITE hierarchy
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
WLE98877
LinkDB
All DBs
Position
complement(1970255..1971820)
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AA seq
521 aa
AA seq
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MMMSGVAVLLFVLALIAGVAVGFVLRKKFVEGNQADIEGQGRLIVENAIQEAEQIKKERL
LQVKEEIYQSKKEAEEEIKGSRKELKDEQLRLDRKLDKVHDELNDLKKKESGLQAREKMI
NSREQAVVEREKELSSLIDQQRYELENISGITREQAKERLMDSIESEARMDAAKRLSRIE
NEMKLEADRKGKNILALAIARYAGDYVADKTVSMVPLPSDEMKGRIIGREGRNIRAIEAA
TGIDIIIDDTPEAVILSGFNPIRREVARQSLIQLISDGRIHPARIEEVVAKVTGELDVEI
KEVGEQATFDVNAHGVHVELVNLIGRLKYRTSYGQNILQHSLEVAFLCGVMAAELGLDVK
KAKRAGLLHDIGKAVDHEVEGSHAMIGRDLVKKYGEADDIVYAVGAHHEDLPPKSVLDVL
VQSADALSGARPGARKEMLQSYVKRLEDLEHIANAFEGVDKSYAVQAGRDLRIIVDSQKV
HDDDAMLLSRDIAKSIEEQLTYPGQIRVTVIRETRAVEYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgagcggtgtggcagtacttctctttgttctggcattaatagccggggtagct
gtcggttttgtgctgagaaagaagtttgttgaagggaaccaggcggacattgaggggcag
gggcgcctgattgtagaaaatgctattcaggaagctgagcagatcaagaaagagcgtttg
cttcaggtcaaagaggaaatttatcagtcaaaaaaagaagctgaagaggaaataaagggg
tcccgtaaagagctcaaagatgaacagctcaggcttgatcggaagcttgataaagtccat
gatgaactcaatgatctgaagaagaaagagtcgggacttcaagcaagagaaaaaatgatc
aacagtcgtgaacaggctgttgttgaacgggaaaaggaactgagctcccttattgatcag
cagcgttacgagctggagaatatttctgggataacccgtgagcaggccaaagagcggctt
atggattccatagagagcgaagcgcggatggatgcggccaagcgtttgagccgtattgaa
aatgagatgaagcttgaggctgaccggaaaggtaagaatatcctcgcgttggccattgcc
cgctatgccggtgattatgttgccgataaaacagtatccatggtaccgctccctagcgat
gagatgaagggacggattattggtcgtgaaggtcggaatattcgagcgatcgaggcggca
accgggattgacattattattgatgacaccccggaggcagtgatcctttccggttttaac
cctatccggcgcgaagtggctcgccaatcgctgatccaactgatctccgacggcagaatt
catcctgcccggattgaagaagtggttgccaaagtgactggcgagctggatgtagagatt
aaagaggttggtgagcaggccacctttgacgtcaatgcccatggtgtacatgtggaattg
gtgaatctgatcggtcggttgaaataccggaccagctacggtcagaatattttacagcat
tctctggaagtagcctttctctgcggtgttatggcggcggaactgggcctggatgtgaaa
aaggccaagcgggccggtttgcttcatgatatcggcaaggccgtggaccacgaagtggaa
ggctcccatgcgatgatcgggcgtgatctggtgaaaaaatacggtgaggccgatgatatt
gtttatgccgtgggtgcccatcatgaggatcttccacctaaaagcgttcttgatgtcttg
gtgcaatcagcggatgccctgtcaggagcccgtccaggtgcccggaaagagatgctgcag
agctatgtgaagcgtttggaagatcttgaacatatagctaatgcatttgaaggggttgat
aaatcctatgctgtgcaggcgggccgtgatttgcggattatcgtggacagccaaaaagtg
catgatgatgatgccatgctgttgagtcgtgatattgccaagtccattgaggagcaattg
acctatccgggacagattagagtgacggtgattcgggaaacccgagctgtcgagtacgcg
aaataa
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