Candidatus Electrothrix communis: QTN59_08705
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Entry
QTN59_08705 CDS
T09821
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ecom
Candidatus Electrothrix communis
Pathway
ecom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QTN59_08705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecom03019
]
QTN59_08705
Enzymes [BR:
ecom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QTN59_08705
Messenger RNA biogenesis [BR:
ecom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QTN59_08705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
UvrD-helicase
AAA_19
AAA_22
UTP25_NTPase-like
Flavi_DEAD
MIC19_MIC25
PhoH
Motif
Other DBs
NCBI-ProteinID:
WLE98904
LinkDB
All DBs
Position
2000235..2001497
Genome browser
AA seq
420 aa
AA seq
DB search
MNFTEFGFKPAIVAAIKKCGYSIPTDIQQQAMPHLLQGRDLLGLAQTGTGKTAAFVLPTL
QRLTDEAGKKVKALILTPTRELSEQVHENIQQLAQGTRLRSCTLYGGVSKASQIQKLRQG
VDIVVACPGRLLDHLNSKTVDLSSIEVLILDEADQMCDKGFLPDIRRILKQVPRQRQSMV
FSATMPKEIRRFVEEILTDPITVRVNHEKPTATIKHALFQVAQTQKTALLKHILQSEPMT
TTLVFTRTKHKAKNLARQLQQFGFKATSLQGNLSQNQRKKAMDGFRTGTFNILVATDIAA
RGIDVSGISHVVNYDVPDTVETYTHRVGRTGRALQTGDAYTFATREDAKMIQSVERRLGK
NITRKTIDAPLNNNTSTAAPSAGSAALDEKKRGTSAPRQKAKGKPRKQRSNSFDFGLSAN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaattttacagaattcggttttaaaccggccatcgtagctgccattaaaaaatgtggc
tacagcatccctacagacatccaacagcaggccatgccgcatctcttgcaaggccgcgat
ttgctggggcttgcccaaacgggcaccggtaaaacagcagcatttgttcttcctaccctg
caacgccttaccgacgaagcaggaaaaaaagtaaaagcattgattctgaccccgacccga
gaactctcggaacaggttcatgaaaatattcaacaactggcccagggtacccgtttgcga
agctgtacgctctacggcggcgtcagcaaagcaagccagatacagaaactcagacaaggc
gtggatatcgtcgtggcctgtcctggtcgactgcttgatcatctcaactcaaaaaccgtt
gatctttcctcgattgaggtcctgattctggatgaagcagatcagatgtgcgacaagggt
tttctgccagacattcgccgtatcctcaagcaggtgccgcgccaaaggcagagcatggtt
ttttcagcaacaatgccgaaagaaatacgccgctttgttgaagagattctcaccgatccg
atcacggttcgggttaatcatgaaaaaccgacagcaactatcaagcacgcgcttttccag
gtagcacagacgcagaaaacagccttgctgaaacacatcctgcagagtgaacccatgacg
accaccctcgtctttacccggaccaagcataaggcaaagaatctggcccgacagctgcaa
caatttgggtttaaagcgacttcgcttcaaggtaatctgtcccagaaccaacgtaaaaag
gctatggacggcttcagaaccggtacattcaatatcttggttgctacggatatcgctgca
cggggcatagatgtctcaggtatttcccatgttgtgaattacgatgtgccggatactgtc
gagacatacacccatagagtcggtcgaaccggcagagcgttacagaccggagatgcatac
acctttgcaacccgagaagacgcaaaaatgattcagtccgttgaacgtcgcctgggaaaa
aacatcacccgcaaaacaattgacgcgccgctcaacaataacacctcaacagcagcgccc
tcagctggctcagccgctcttgatgagaaaaagaggggcacgtccgctcctcgccaaaaa
gcaaaaggtaaaccgagaaaacaacgctcaaactcgtttgattttggcttatccgcaaac
taa
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