Candidatus Electrothrix communis: QTN59_13500
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Entry
QTN59_13500 CDS
T09821
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ecom
Candidatus Electrothrix communis
Pathway
ecom03030
DNA replication
ecom03410
Base excision repair
ecom03420
Nucleotide excision repair
ecom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QTN59_13500 (polA)
03410 Base excision repair
QTN59_13500 (polA)
03420 Nucleotide excision repair
QTN59_13500 (polA)
03440 Homologous recombination
QTN59_13500 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecom03032
]
QTN59_13500 (polA)
03400 DNA repair and recombination proteins [BR:
ecom03400
]
QTN59_13500 (polA)
Enzymes [BR:
ecom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QTN59_13500 (polA)
DNA replication proteins [BR:
ecom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QTN59_13500 (polA)
DNA repair and recombination proteins [BR:
ecom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QTN59_13500 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QTN59_13500 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH
HHH_2
DNA_pol_lambd_f
RecR_HhH
DNA_polI_exo1
IMS_HHH
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WLE95690
LinkDB
All DBs
Position
complement(3042758..3045511)
Genome browser
AA seq
917 aa
AA seq
DB search
MSQQTELFPAPPKKKEVYLIDGSAYIYRAYHAIKPLSNNSGLPTHAVYGFTTILRRLLRE
KQPEYLAVAYDTKGPVFRHKISSDYKANRPPMPEDLVPQIPYIHKMVAAYNLLSMSADDL
EADDLIASAARLLVEQGCKVVVVSGDKDLLQLVSEDITMWDPMNDRLMDVAAVEEKYGLS
PVQLLDYLSLTGDSADNISGVPGVGPKTAQKLLAEYKTLEGLYAQVDSLKKSKMKERLIA
HKEDAFLSRDLVRLQDKAEVEADLQAYLVRESDPEALRELLTELEFFTLLKSDVPAAKVA
TDGFTLVRQRDELERLIEQLGEQLGEQLGEQLQGAGQLVVDTETTSLDPLEAELVGISLC
ADTKQAWYLPCGHRDTEGDLLPDQLALQDIVELLGPLLTDSSLSKIGHNLKYDYAILAAP
QNGGIRLAGPLYDTMLGAWLLEPGRRSYKLDDLCQELDLKLTPFSEVVAGDKAPDAFCRV
PPEKAKDYSCEDVYGSLRLFEEQRAELEKQGLWKLFAEVEGPLIQVLAAMEETGILLDKA
VLQGLTKEFGERLDVLEQEIYGVAGHAFNINSSQQLAQVLFDELGLPKGRKTKTGYSTDI
KVLEKLSHKHELPALIVRFRNLAKLKSTYVDKLQTHISPVTGRVHSSFNQWGTATGRLSS
SNPNLQNIPIRSEEGRRIRSAFIARPGSLLLSADYSQIDLRVLAHYSQDAALLEAFRGEG
DIHSQTAAEIFQVSLPLITGEMRRVAKSINFGIVYGMSAFGLSEQLGISRKEAQTFIDRY
FVHYPGIQQFMDSIMDQARADGYVTTLLGRRRQLPEINVSNANRRQFAERMAINTPIQGT
ASDIIKLAMIKVHEELIAQKAQAKLLLQIHDELVLEVPEDELESISVMVKEAMESVMALD
VPLKVNTEVGGSLDKGE
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacagacagagctgttccctgctcccccgaaaaagaaagaagtctacctgatt
gatggcagcgcctatatctacagggcctaccatgctatcaaacccctgagcaataacagc
gggctgcccacccatgctgtctatggttttaccacgatcctgcgtcgactcctgcgggaa
aaacagccggaatatcttgctgtggcctatgacaccaaggggccggtttttcgccataaa
atttcatctgattacaaggccaatcgtccccctatgcccgaggatctcgttccccagatc
ccctatatccataagatggtcgctgcctataacctgctgagtatgtcggcggatgatctg
gaggccgacgacctgattgcctcggcagctcgcctactggtcgagcagggctgcaaggtg
gtggtggtgtccggggataaggatctcttgcagctggtctccgaagacatcaccatgtgg
gatcctatgaatgatcggctcatggacgtggctgcggtggaggagaaatacgggctcagc
ccggtccaactccttgattatctctcgctcaccggcgattcggcagataatatcagcggt
gtgccgggagtagggcccaagactgcgcagaagcttcttgcagaatacaagaccttggaa
gggctgtatgcgcaggtcgacagtttgaaaaagtccaagatgaaggagcggctcatcgcc
cataaggaggacgcctttctttcccgcgatctggttcgtctccaggataaggccgaggtt
gaggctgatcttcaggcctatttggtgcgcgaatctgaccccgaggccctgcgggagctg
ctcacagagttggaatttttcaccctgctcaagtctgatgtcccggcggcaaaggttgcc
actgacggttttaccctagtccggcagcgggacgagttggagcggcttatcgagcagctt
ggggagcagcttggggagcagcttggggagcagctgcaaggggctgggcagctggtggta
gatacagagaccacctcccttgatcccctggaagcagaactggtgggtatctctctttgt
gccgacacaaaacaggcttggtatctaccctgcggtcatcgggatactgagggggatctc
ttgcctgatcagctggctttgcaggatattgtggaactgctcgggcccctgctcacagac
tcctcactttctaagatcggccataacctcaagtacgattatgccatcctggcagcaccc
cagaacggcggcattcgtttagccgggcccctctatgatactatgctcggggcctggttg
cttgagcccggtcgccgctcctataaactggatgacctctgtcaggaacttgacctgaaa
ctcaccccttttagcgaggtggtggcaggggataaggccccggatgccttttgtcgggta
cctcctgagaaggccaaagattacagctgcgaggatgtttacggcagcctgcgccttttt
gaggaacagcgagccgagttggaaaagcagggactgtggaaactttttgccgaggtggaa
gggccgttgatccaggtgctggccgcaatggaggagaccggtatcctgctggacaaggcg
gttctgcaaggactgaccaaagagttcggcgagcggctggatgtgctggaacaggaaatc
tatggcgttgccggacatgcctttaatatcaactcgtcgcagcagttggcccaggtactt
tttgacgaactcggtctccccaaaggccgcaaaactaagaccggttattccacggacatc
aaggtgctggaaaagctctcccataagcacgaattgcccgccctgattgtccggttccgt
aatctggccaagctgaaatccacctatgtggataaattgcagacccatatcagccctgtc
acgggtcgggtgcattcctcctttaatcaatggggcacggcaaccggtcgtctcagctcc
agcaatccgaacttgcagaacatccccatccgcagcgaggaaggccgccgcattcgctcc
gcctttattgcccgaccgggcagcctgctgctgtcagcggattattcgcagatcgatctg
cgggtcttggcgcattacagccaggatgcagccttattggaggccttcagaggggagggg
gatatccacagtcagaccgctgctgagatctttcaggtgtccctgcccctgatcaccggg
gagatgcggcgggtcgccaagagcatcaacttcggtattgtctacggtatgtccgccttc
gggctgtcagagcagctcggtatcagtcgcaaggaggcccagacctttattgatcgctat
tttgtccattatcccggaattcagcagtttatggacagcatcatggatcaggcccgtgca
gacgggtatgtcaccaccttgctgggcaggcgtaggcaactaccggagattaatgtgagc
aacgctaaccgtcgtcagtttgccgaacgcatggcgatcaatacgcctattcaggggacg
gcctcggacatcatcaagctggctatgatcaaggtgcatgaggagttgattgctcaaaag
gcccaggccaagctgctcttacagattcatgatgagctggtgttggaagtgcccgaggat
gagctggagtcgatctctgtcatggtcaaggaggcgatggagtcggttatggcgctggat
gtaccgctgaaggtcaataccgaggttggggggagtttggataagggtgagtag
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integrated database retrieval system
