Candidatus Electrothrix communis: QTN59_14065
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Entry
QTN59_14065 CDS
T09821
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ecom
Candidatus Electrothrix communis
Pathway
ecom03030
DNA replication
ecom03430
Mismatch repair
ecom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QTN59_14065 (dnaE)
03430 Mismatch repair
QTN59_14065 (dnaE)
03440 Homologous recombination
QTN59_14065 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecom03032
]
QTN59_14065 (dnaE)
03400 DNA repair and recombination proteins [BR:
ecom03400
]
QTN59_14065 (dnaE)
Enzymes [BR:
ecom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QTN59_14065 (dnaE)
DNA replication proteins [BR:
ecom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QTN59_14065 (dnaE)
DNA repair and recombination proteins [BR:
ecom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QTN59_14065 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WLE95799
LinkDB
All DBs
Position
complement(3182613..3186128)
Genome browser
AA seq
1171 aa
AA seq
DB search
MSTPFVHLHVHTQYSMLDGAIRLGDLLDKTQSYGMNAVAVTDHGAMYGALEFYTKANKAG
VKPLVGCEFYISETDHLVHNKSAGHNFHIVLLAMNETGYRNLMKLASIAQTAGFYYRPRI
DRKLLFAHQEGLLALTACLHGEIPWTITHHGLDKAKEKALDLQKVFGDRLYFEIQENGIP
EQRTVNDGLLELGNDLDIKVVATNDCHYLNQDESYAHEVLLCIQTSKTINDPNRFRFSTD
ELYFKSPDVMAKQFSYCPEALANTLEVADRCNLELEFNENHFPIFPVPENESLESLFEKA
CRDGLDIRLEHLRSLQEVSKELEQQYQERLEMEIGVIQEMGFSGYFLIVADFINWAKSQK
IPVGPGRGSGAGSLAAFCMSITDIDPIPYGLLFERFLNVERVSMPDFDVDFCKERRDEVI
DYVRRKYGGDDHVAQIVAYGSMKARAVLRDVGRVLEVPLPVVDRIAKLVPDELKITLKKA
IDKEPRLRDAMQQDPAVRELLKVAQTLEGLSRHKSTHAAGVVVSPKAMVEYLPVCVGSKK
EILTQFDMKYTEMTGLIKFDFLGLKTLTVIDRALKLIELDIGTWIDLSKVPMDDQRTYDL
LCAGNSLGVFQLESDGMRELLVKMAPEQFTDLIALVALYRPGPLDSGMVDQFVETKHGRR
PPEYPLPQIKAVLKETYGVIVYQEQVMKISNILASYSLGDADILRRAMGKKIPEVMEEER
GKFMAGAEGNNIPKEKAAYVFDLMAKFAGYGFNKSHSAAYALIAYQTAYLKAHYPAQFLA
ALLSCDVDNTDKVVKYINECKQMSIPVLPPDINESHHDFTVINDRIRFGLAAVKNVGGSA
LDSMIREREENGPYTSLADFCGRIDSSKVNRKVLENLVKAGAFDFVQVKRAQLMEVLDQA
LEQAKAVQRDRLSGQMSLFAVGGSKEESAPSAEIKFPDIDEWPQLKKLSYEKETIGFFLT
GHPLDGVIDTIRMVADADIEALENRREGQVVRVGGLIQQYKEHISKKGDRMAFTVLEDMS
SSVEVIVFPETFARCSHYLGKDEPLIVLGTVQQGERGAKIIAEDIYSLDKAVEQFTEQAS
IRLPADRIGRNQLIELKELIYQFHGSAPIKLTLHFDGRGEVDILPMKDITVRPCSDFFQK
VKASFGPGCLSVQMRQAEVKRKKRFGGGRGG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccctttgtccatctccatgtccacacccaatactccatgctcgacggggcc
attcgcctcggcgatttgcttgataagacccagtcctatggcatgaacgctgtggcggtc
accgaccacggggccatgtacggagctctggagttctataccaaggccaataaggccgga
gtcaaacctctggtcggctgtgagttctatatttcggagaccgatcatcttgttcataac
aagagcgcaggtcataatttccatatagtgctcctagccatgaacgagaccggctatcgc
aatctgatgaagctcgcctccatcgcccagactgctggattttattataggccccgcatc
gaccgcaagttactttttgcccatcaggagggcctgcttgccctgaccgcctgtctgcac
ggagagattccctggactatcacccatcatgggttagataaagcgaaggaaaaggccttg
gacctgcaaaaggttttcggtgaccgtctctatttcgagattcaggaaaacggcatcccg
gagcagcgaacggtcaatgacgggttgctggagctgggtaatgatttggacatcaaagtg
gtggccaccaatgactgccattaccttaatcaggacgaatcctacgcccatgaggttctg
ctctgtattcagaccagcaagaccattaacgatcccaatcgtttcagattttccacagat
gaactgtatttcaagtcgccggatgtcatggccaagcagttcagttattgcccggaggcc
ttagccaataccctagaggtggctgaccgctgcaatcttgagcttgaattcaatgagaat
cattttcccattttcccggtgccggagaatgaatccctggaaagcctgtttgaaaaggcc
tgtcgggacggcctggatatccgccttgagcatctccgcagcctgcaggaagtttccaag
gaactggagcaacagtaccaagagcggctggaaatggagatcggggttattcaggaaatg
ggtttttccggttattttctcatcgtggctgattttatcaactgggccaagagccagaaa
atcccggtcggtccgggaaggggatcaggagcaggcagtttggctgccttttgcatgtcc
attacggatatcgatcccattccctacggcctgctttttgagcgtttcctcaacgtggag
cgggtgtccatgcctgactttgacgtggatttctgcaaggagcggcgggatgaggtgatc
gactatgttcgccgcaagtacggcggtgatgaccatgtggcccagatcgtggcttacggt
tccatgaaggctcgggctgtactccgagacgtgggtcgggttttagaggtgcctctgcct
gtggtggaccggattgccaagctggtcccagatgagctaaaaatcaccctgaaaaaggcc
attgacaaggaaccccgcctccgtgacgccatgcagcaggatcccgctgttcgggagttg
ctcaaggtggcccagaccctggagggcctgtcccgtcacaagtccacccatgccgccggg
gtggtggtgtcgcccaaggctatggtggaatatctgccggtctgtgtcggctccaaaaag
gagatcctgacccagtttgacatgaagtacaccgagatgactgggttgattaagttcgat
tttctcggcctcaagaccctgaccgttattgatcgggccctgaagctcattgagctggat
atcggcacctggattgatttaagtaaagtccctatggatgatcagcgcacctatgatcta
ttgtgtgcgggtaacagcttgggcgtgtttcagctggagagtgacggtatgcgagagctg
ttggtcaagatggctccggagcagtttaccgatctgatcgccctggtggccctgtatcgg
cccggtcccttggattccggtatggtggatcaatttgtcgagaccaagcatggccgccgt
cccccggaataccccttgccccagatcaaagctgtcctgaaagagacctacggcgttatt
gtctaccaggagcaggttatgaagatatccaatattctagcttcgtacagcctaggtgat
gcggatattctccggcgggctatgggtaagaagattcccgaggtcatggaggaagaacgg
ggcaaattcatggccggggctgaggggaataatattcccaaggaaaaggcggcctacgtc
tttgacttgatggctaagtttgcgggctacggctttaataaatctcattcagccgcctat
gccctgatcgcctaccagaccgcctatctcaaggcccattatcccgcccagtttctggct
gccctgctgtcctgcgatgtggataacacggacaaggtggtcaagtacatcaacgaatgc
aagcagatgtccatcccggtcctgccgccagatatcaacgagtctcatcacgatttcacg
gttatcaatgatcggattcgtttcggactggcagcagtcaaaaatgtgggtggttctgcc
ctggattccatgatcagggaacgggaggaaaacggcccttatacttcgctggctgatttc
tgcggtcggatagactcaagtaaggttaaccggaaggttttggaaaatctggttaaggcc
ggagcctttgactttgtgcaggtgaaacgagcccagctcatggaggtgctggaccaggcc
cttgagcaggccaaggctgtgcagcgggatcgcctgagcggccagatgagcctgttcgca
gtgggcggaagcaaggaggagagtgcgcccagcgctgaaattaaatttcccgatatagac
gagtggccgcaattaaaaaagctctcctatgaaaaggagaccattggtttcttcctgacc
ggccaccccttggatggggtgattgatacgatccgcatggttgctgatgcggatattgag
gctttggagaatcggcgggaagggcaggtcgtccgcgttggcgggctgatccagcagtac
aaagagcatatctccaaaaaaggcgaccgcatggcctttactgtgttggaggatatgagt
tccagtgttgaggtgattgtctttccagaaacctttgcccgctgctcacattatctcggc
aaagacgaaccccttatcgtcctcggcacagtccagcagggagagcgaggggcaaagatt
attgctgaagacatctactcgctggataaggcggtggagcagtttaccgagcaggcttcg
atccgtctgcctgccgataggatcggacggaaccagctcatcgaactcaaggagctgatc
tatcaattccacggctccgccccgatcaaactgaccctccatttcgatggaagaggcgag
gtggatatcctgcccatgaaggatatcactgtgcggccttgttcggattttttccagaag
gtgaaggcgtccttcgggccgggatgtctgtccgtgcagatgcggcaggctgaggttaag
cggaagaagcggtttgggggtgggaggggaggatga
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integrated database retrieval system
