Candidatus Electrothrix communis: QTN59_14345
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Entry
QTN59_14345 CDS
T09821
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
ecom
Candidatus Electrothrix communis
Pathway
ecom02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ecom00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QTN59_14345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecom03000
]
QTN59_14345
Transcription factors [BR:
ecom03000
]
Prokaryotic type
Helix-turn-helix
Other families
QTN59_14345
BRITE hierarchy
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
GAF
HTH_8
GAF_2
AAA
AAA_2
Mg_chelatase
bpMoxR
AAA_16
DUF815
AAA_7
AAA_22
AAA_30
HTH_50
nSTAND3
RsgA_GTPase
ATPase
NUDE_C
AAA_3
APC_N_CC
NACHT
Motif
Other DBs
NCBI-ProteinID:
WLE95854
LinkDB
All DBs
Position
complement(3241040..3242668)
Genome browser
AA seq
542 aa
AA seq
DB search
MTTDLHTLIRNQDLARQDLSCLYEITKILATGTDLQESLNSVVRVLADMKEMENGTVTIV
NPLTRELEIEIACGITAIAQKKGKYKLGEGITGRVVSTGEPVIVPRIGEEPLFLNRTGIR
SNEEKKKSSFICVPIKVTFENSEQKVFTQDIHSQPDNLSIGALSVDRYYEKEFGSQSEQD
LRFLTIVSALIAQAVHRVQVINREKEALQQENQRLRRELSAKNRLSDIIGNSSRMQEVFE
MTHRVADSNATVLLRGESGTGKSLVAKALHHNSRRADKPFLVVNCSALPENLLESELFGH
ERGAFTGAEHRKKGRFEQAEGGTLFLDEIGEISTTVQIKLLNVIQERCFQRLGGTEIIKA
DIRLVAATNRNLEEAVLEGVFREDLYYRLNVFPVHLPPLRERRTDILLLAEYFLEQFCKE
NNKRIERISTTAIDLLIKYHWPGNVRELQNCMERSVLICDSNTISSVHLPPTLQSSETVS
TDSQLSLAGAVESFERELIIDALKHTNGNQTKAAARLETSLRIINYKIHNYGIDPKQFKV
KS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgacctacatactttaataagaaatcaggatcttgcgcgtcaagacctctcc
tgtctttacgaaattacgaaaattcttgctaccggaaccgaccttcaggagagtctaaac
agtgtggtccgagtgctggcggatatgaaagaaatggaaaacggtaccgtaactatcgtt
aatccattgaccagagaactggaaattgagattgcctgtgggattacagcaatagcgcaa
aagaaaggaaaatataaactgggtgaggggatcaccggtcgagttgtttccaccggtgaa
ccggtgattgttccccggatcggtgaagagcccttattcctcaatagaaccggaatccgg
agtaacgaggagaaaaagaaaagttcttttatctgcgtacctatcaaggtcacttttgaa
aactccgaacaaaaggtttttactcaggatatccatagccagccagataatctatccata
ggcgccttgtctgttgatcgatattatgaaaaagaattcggctcgcaatcagaacaggat
ttgcgttttctcaccattgtcagcgcgttgatcgcccaggctgtacacagggttcaggtc
ataaacagagaaaaagaggctctccagcaggaaaatcagcgcctccgcagggagttatcc
gccaagaaccgcctgagtgatattattggaaattcttcacggatgcaggaagtgtttgaa
atgacgcatcgggttgcggattccaatgccactgttctgctacgaggtgaatccggtacc
ggtaaatccttggttgccaaggcattgcatcataattctcgccgagcagataaacccttc
ttggtggttaactgctccgccctccctgaaaatcttctggaaagcgagctgttcgggcat
gaaagaggggcctttaccggggcggaacatcgaaagaaagggcgatttgaacaggccgaa
ggtggaacccttttcctggacgaaatcggcgagatcagcaccactgtccagataaagctt
ctcaatgtgattcaggaacgctgctttcagcgtctcggaggaactgaaattattaaagcg
gatattcgccttgttgcggccaccaaccgcaatcttgaggaggccgtgcttgaaggcgtg
ttccgagaggatctgtattacaggctcaatgtctttcctgtgcatctccctcccctccga
gaacggcggacagatatcctgctgctggcggaatattttctggagcaattttgcaaagaa
aataataaacggattgaacggatatcgaccacagctattgacctgctgattaaatatcat
tggccgggcaatgtccgtgaattacaaaactgcatggaacggtccgtacttatctgtgat
tctaacacgataagctcggtccatctcccccctaccctgcaaagttcagaaacggtgagc
actgacagccaactctctttggccggtgcggtagagagctttgagcgggagctgattatt
gatgcacttaagcataccaacggcaaccaaaccaaggcggcagcccgcttggaaacaagc
ctccggatcattaattataaaatacataattacgggattgatccgaagcagttcaaggta
aaatcatga
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integrated database retrieval system
