Candidatus Electrothrix communis: QTN59_15165
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Entry
QTN59_15165 CDS
T09821
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ecom
Candidatus Electrothrix communis
Pathway
ecom00300
Lysine biosynthesis
ecom00470
D-Amino acid metabolism
ecom01100
Metabolic pathways
ecom01110
Biosynthesis of secondary metabolites
ecom01120
Microbial metabolism in diverse environments
ecom01230
Biosynthesis of amino acids
Module
ecom_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ecom00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QTN59_15165 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QTN59_15165 (dapF)
Enzymes [BR:
ecom01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QTN59_15165 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
WLE96013
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All DBs
Position
complement(3422230..3423084)
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AA seq
284 aa
AA seq
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MQTPDFPVPFVKMSGTGNDFLIIDHRKPLLAPEAMAEFAAKICRRKFSAGADGLILIEDS
SEADFQWRFFNADGSVAEMCGNGARCAARFAFLQGIAPAQMRFATLAGIIEASVSEKDVA
VKMTDPFGLNMHQPITAEGKKYTVHSIDTGVPHAVVFVDDIDQTDVRALGSRIRHHEAFM
PAGTNVNFAQRQGDAIKVRTYERGVEDETLACGTGAAACAIIAALLDQAASPVDIITSGN
DRLTILFDLKKEKVSGDNNIVYNVFLKGPAHTIYSGELDAEALL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcagacacctgactttcctgtcccctttgttaagatgagcggcacaggcaatgatttc
ctcattattgaccaccgcaaaccactccttgctccagaagctatggccgaattcgccgcc
aaaatctgtcggagaaaattttccgcaggggccgacggcctgatccttatcgaggattct
tccgaagcggattttcaatggcgttttttcaacgcggatggctcggttgcggaaatgtgc
gggaacggggcccgttgcgcggcccgctttgcctttctacaggggattgctccggcacaa
atgcgttttgccaccttggccggaattatcgaggccagcgtgtcggagaaagatgttgcg
gtcaagatgactgatccgtttggcctgaacatgcatcagcccattacggcggaggggaaa
aaatatacggttcacagcattgataccggcgtacctcatgctgtcgtctttgtcgatgat
atcgaccagacagatgtccgtgccttgggcagtcgcatccgccatcatgaggccttcatg
cctgccgggaccaatgtcaacttcgcccaacgccaaggggatgccatcaaggtcagaacc
tatgaacggggcgtggaagatgaaaccctggcctgcggtactggagctgcggcctgtgcc
atcattgccgcactcctggatcaggccgcctcaccggtggacatcattacctcgggcaat
gatcgtttgactatcttgttcgatctcaagaaggagaaggtgagtggagacaataatatt
gtttataatgtttttctcaaaggaccggcccataccatttattcgggagaactcgacgct
gaggctttgctttaa
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