Candidatus Electrothrix communis: QTN59_15855
Help
Entry
QTN59_15855 CDS
T09821
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ecom
Candidatus Electrothrix communis
Pathway
ecom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QTN59_15855 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecom03400
]
QTN59_15855 (recD)
Enzymes [BR:
ecom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QTN59_15855 (recD)
DNA repair and recombination proteins [BR:
ecom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QTN59_15855 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
NAT10_TcmA_helicase
UvrD_C
UvrD-helicase
AAA_22
PhoH
SLFN-g3_helicase
AAA_16
DEAD
AAA_28
nSTAND3
AAA_5
TrwB_AAD_bind
AAA
Motif
Other DBs
NCBI-ProteinID:
WLE96148
LinkDB
All DBs
Position
3584030..3585934
Genome browser
AA seq
634 aa
AA seq
DB search
MHKQLQQACDQGEIRLLDLHLGLFLEKQAVDRDGKTSKDTKNIESTGSRPGHPSLLLAAT
LASAAMGNGHVCYPLGEAPEQPALAEMVEENCPGPEQWREELLATSVVGRPGEISPLILD
EKNRLYLRRFFCYEEFIATALRRRAATALNLDRQVASQLLGRLFPQEEEGAIDYQQMAAA
LALLKPLVIISGGPGTGKTHTVARILAAIQALHARQQGEQRGQRKKLINIALAAPTGKAA
ARLEESISKAKLSLPKDLRHDIPEQAQTLHRLLGSRPGATAFRFNRDNPLYLDLLILDEA
SMIDVEMMVALLEALPEKTRIILLGDRNQLASVEAGSLFADLCGNDELGWLPQLCGELEQ
LTGTSGLPSSSSGEASDPTLADSLVLLRTSYRFQDNSGIGCLAAAVKSGSVEQVNRAMAE
NFADVERVQYTGAKREQWLEGRIRKGFQPMLTASSPEQAFAALEEFRFLCALRRGPDGVE
GINTLVTQVLRRAGLISPQNTEWYQGRPIIILRNQYEMQLFNGDTGILWQDEKGRLRAWF
RRADNCLSSISLARLPEHETAYAITIHKAQGSEFDQVLLLLPDEESRVLSQELLYTGITR
ARSRLILCASSDILATTVSRKTQRFSGLAEKLHG
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcataagcagctccaacaggcctgtgaccagggagaaatacggctcctggatctccac
ctcggtctttttttagaaaagcaggccgttgacagagatgggaagacctccaaggatacc
aagaatatcgaaagcacgggcagccgaccagggcacccatccctgctgctggccgcaacc
ttggccagtgccgcaatgggcaacggtcatgtctgttatcccttgggcgaggcacctgag
cagccagctctggcggaaatggtggaggaaaactgtcccggcccggaacaatggcgggaa
gagctgctcgccacctctgttgtcggtcgaccaggagaaatctctcccctgattcttgac
gaaaagaaccgcctctatctccgccgttttttctgctacgaggaattcatcgccacggcc
ttacggcgacgggcggctaccgctcttaatcttgatcgccaggttgcttcccaattactg
gggcggctttttcctcaggaggaagagggtgctattgattatcagcaaatggctgctgcc
ttggccctgctcaagcctctggtgattatttccggcggaccgggaactggcaagacccat
actgtggcacgtatcctggcagcaattcaagccctccatgcccggcaacagggtgaacag
agggggcagaggaaaaagctcatcaatatagccttagccgccccgacaggtaaggctgcg
gcccgcctggaagaatctatcagcaaggccaagctctctttgccgaaagacctccggcac
gatatcccggaacaggcccagaccctgcatcgactgctcggttctcgtcccggtgcaacg
gcttttcgttttaacagagataatcccttatacctggatctgctgatcctggatgaggcc
tccatgattgatgtggagatgatggtcgctctcctggaagctctgccggagaagacgcgt
attattttgctcggggatcgcaatcagctggcctcggtggaagcaggaagcctgtttgcc
gatctctgcggcaacgatgaacttggttggttgccgcagctctgcggagaattggagcag
ctgaccggcacctcgggcttgccttcctcctcatccggtgaagcatccgatcctaccttg
gcagactccctggtcctcctgcgtaccagttatcgttttcaagataacagcggcatagga
tgccttgctgccgcagtgaaaagcggttccgtggagcaggtgaacagggcgatggcagaa
aattttgctgatgtggagagagtgcagtacactggagcaaagcgggagcaatggcttgag
ggtcggatcagaaagggattccagcccatgctgacggcctcttcgccggaacaggccttt
gccgccctggaagagtttcgttttctctgcgccctgcgcagggggccggacggggttgaa
ggcatcaataccttggtgacccaggtccttcggcgagctggtttgatatctccgcaaaac
acggaatggtatcagggaagaccgatcatcattctccgtaatcagtatgagatgcagctc
tttaacggagatactggcatcctttggcaggatgagaaggggcgtttacgggcctggttt
cgccgagcggataattgtctttcttcaatcagcctggcgcgtttacctgagcatgagacg
gcctatgccattacgattcataaggcccagggatcggagtttgatcaggtcctgcttctc
ttgcccgatgaggagagtcgggtactcagtcaggagcttctctatacaggtattacccgg
gcccgcagcaggctcattctctgcgcatcttcggacatactcgcaacaacggtctcacga
aaaacacagcgtttttccgggttggctgaaaaactgcacggttag
DBGET
integrated database retrieval system
