Candidatus Electrothrix communis: QTN59_16850
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Entry
QTN59_16850 CDS
T09821
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ecom
Candidatus Electrothrix communis
Pathway
ecom03030
DNA replication
ecom03430
Mismatch repair
ecom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QTN59_16850 (holB)
03430 Mismatch repair
QTN59_16850 (holB)
03440 Homologous recombination
QTN59_16850 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecom03032
]
QTN59_16850 (holB)
03400 DNA repair and recombination proteins [BR:
ecom03400
]
QTN59_16850 (holB)
Enzymes [BR:
ecom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QTN59_16850 (holB)
DNA replication proteins [BR:
ecom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QTN59_16850 (holB)
DNA repair and recombination proteins [BR:
ecom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QTN59_16850 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Mg_chelatase
AAA_5
RuvB_N
AAA_28
SRP54
nSTAND3
AAA_16
AAA_22
CbiA
ArsA_ATPase
DNA_pol3_delta
AAA_31
ResIII
DUF2284
AAA_18
AAA_25
AAA_33
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WLE96337
LinkDB
All DBs
Position
complement(3803253..3804239)
Genome browser
AA seq
328 aa
AA seq
DB search
MPFSSIIGQPKAVNLLTRALNGNRLAHGYLFVGPGGVGKTTTAHALAAHLFCQTAEASSP
CGHCSSCVKVRSGNHPDLLTIRPEGAGIKIQQIRELKKSLSFPPFEAEMRIIIIEDTQTM
KREAGNSLLKILEEPPPNNLLLLVAADSEPLLDTIVSRCQVIPFMTLPVEQAVAIIQRNH
PEFATEEAEALAKLTGGCPGQAGTLYNDEVLLLHKECIQALSADNGNQAESLEQALYLAG
RLAELKDGLDQLFDLLALSLKENMIALLSENKKTDPDVPSAAREGARERWNLQRLSAMVD
AVDAARRQLARNCNRALVCEVLLLELFA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcctttttcgtcaattatcggccagcccaaggcggtcaacctgctcacccgtgctctc
aacggcaatcgtctggcgcatgggtatctctttgtcggccctggcggggttggcaaaacc
acaacagcccatgccttggcagcacacctcttttgtcagacagcggaggccagctctccc
tgcggccattgcagcagctgtgtcaaggtgcgctctggcaatcatcctgatctgttgacc
atcagacccgaaggagccgggatcaagatccagcaaatccgtgagctgaaaaaaagcctt
tccttccctccttttgaagcggagatgcggattatcatcattgaagatacgcagaccatg
aagcgggaagccggcaatagtctgctcaagatcctggaagaacctcctcccaataatctc
ttgctgctggtagcggcagactctgagcctcttctggacaccatcgtctcaagatgtcag
gtcattccctttatgactttgcccgtagagcaggctgttgcaattattcagcgcaatcac
cccgagtttgctacagaagaggccgaggcgctggccaagttgaccggaggatgtccgggg
caggctgggaccctgtacaatgatgaggtcctgctcctgcacaaggaatgcatccaggcc
ctgtcggcggataacgggaaccaggctgaatcgctagagcaggccctttacctagccggt
cgccttgctgaactcaaggacgggctggatcaactctttgatctccttgccctctccttg
aaagaaaatatgattgccctgctcagtgaaaacaagaaaactgatccggatgtcccctca
gcagcaagagagggagcaagagagcgctggaatttgcagcgtctttctgctatggtggac
gctgttgacgctgctcgtcgtcaactggccaggaattgtaatcgggccttggtttgcgaa
gttttactgctggaactctttgcttga
DBGET
integrated database retrieval system
