Candidatus Electrothrix communis: QTN59_18280
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Entry
QTN59_18280 CDS
T09821
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ecom
Candidatus Electrothrix communis
Brite
KEGG Orthology (KO) [BR:
ecom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecom03009
]
QTN59_18280 (rimO)
Enzymes [BR:
ecom01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QTN59_18280 (rimO)
Ribosome biogenesis [BR:
ecom03009
]
Prokaryotic type
ribosomal protein modification factors
QTN59_18280 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
WLE96616
LinkDB
All DBs
Position
4147939..4149282
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AA seq
447 aa
AA seq
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MQKKMHLTSLGCAKNLVDSEMMLGSLELEGYTTVEDPAEAELLLINTCGFIRPAVEEAVD
EILRLAEYKQKDPTKKLVVTGCMVQRYGKDLQEELPEVDFFVGIDEEKEIASLVKGWSPA
SSSLFPQGPSCFLADSTVPRRLATPFFRSYLKITEGCDNRCTYCMIPAIRGDLRSRSVQD
LIIEAKGLEQGGVKELSLIAQDLTAYGDDFDDLEAGHNLISLLKKLLAETDIPWFRLLYL
YPSSVSSELLELMAEQPRILPYLDIPFQHVSDQVLQKMGRRYGQQDLEQLITMIRRVLPN
CALRTTMMVGFPRETEDDVQKLLDCLQRWQLDHVGVFPYEAEQGSIAADLPEKVDREIRE
ERFARVMELQAEISAQRLQQYVGKKEVVLVEGVSQETELLLEGRTRYQAPDIDGCVFIND
GTASPGDILTVEITEAHTYDLVGGIIR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaaaatgcacctgacaagcctcggttgcgcaaagaacctggtcgattctgag
atgatgctcggttcccttgagctcgaaggatatactaccgtggaggacccggctgaggcg
gaattactcctgattaatacctgcggatttattcgtccggcagtggaagaggctgtggat
gaaattctccgccttgccgaatataagcagaaggatccgacgaaaaaattggtggtcacc
gggtgcatggtccagcgttacggtaaagatttgcaggaggagcttcctgaagtggatttc
tttgtcgggattgacgaagaaaaggagattgcctccttggtcaaaggctggtctccggcc
agttcgtctttattcccccaggggccttcctgctttcttgccgacagcactgtgccgcga
agattggcaactccgttttttcgcagttatctcaaaattaccgagggctgtgataatcgc
tgtacctactgcatgattccggcgatacgaggcgatctacgcagcagatctgttcaggat
ttgatcatcgaggccaagggcttggagcagggcggggtaaaggagctttccctgattgcc
caggatttaaccgcctacggtgatgattttgatgatctcgaagcaggccataaccttatc
tcgctactcaagaaacttcttgctgagactgatatcccctggtttcgcttgctctatctc
tatccctcttcggtttcctcggagcttcttgagttgatggctgagcagcctcgtatcctt
ccctacctggatattccttttcagcatgtcagtgatcaggtcctgcaaaagatggggcgt
cgttacgggcaacaggatttggagcagctcatcaccatgattcgtcgggttttgcccaac
tgtgccctgcggaccactatgatggtcggttttcccagagaaacagaagatgatgtgcag
aagctgcttgattgtctgcaaagatggcaattggatcatgtgggcgttttcccctacgag
gctgagcagggatcaatcgcagctgatttgccggaaaaggtggacagggaaattcgagag
gagcgttttgcccgagttatggaattgcaggcagaaataagtgcgcaacgtttgcaacag
tatgtaggaaaaaaagaggttgttctcgtggagggggtgagtcaggaaacagagctgtta
ttggaaggacgaactcggtatcaggctccagatattgacggctgtgtctttattaacgac
ggaacagcaagccccggtgatattctgacagtagaaatcaccgaggctcatacttacgat
ctggtaggcggaattatccgctaa
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