Candidatus Electrothrix communis: QTN59_18890
Help
Entry
QTN59_18890 CDS
T09821
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ecom
Candidatus Electrothrix communis
Brite
KEGG Orthology (KO) [BR:
ecom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecom03016
]
QTN59_18890
Enzymes [BR:
ecom01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
QTN59_18890
Transfer RNA biogenesis [BR:
ecom03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
QTN59_18890
Prokaryotic type
tRNA splicing ligases
QTN59_18890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Babuvirus_MP
Motif
Other DBs
NCBI-ProteinID:
WLE96735
LinkDB
All DBs
Position
4273246..4274430
Genome browser
AA seq
394 aa
AA seq
DB search
MKKVISTENKPIKLWLDDLEVGALEQAKHLANLPFAFRHIALMPDAHQGYGMPIGGVLAT
EGVVIPNAVGVDIGCGMCAVQTSVQEIKQDALKKIMGDVRKRIPVGFKHHKKAQDESFMP
DSSSGCLDELKIVRGEYRSALKQLGTLGGGNHFLEIQQGSDGFVWLMIHSGSRNLGYKVA
HHYNKMAIALNRKWHTSVPEKWQLAFLPLDGRKGQDYLREMQYCVDFALANRRLMMQRMQ
ETFAEVVGDVVGDVRFEEMINIAHNYAAMEHHFKKDVMIHRKGATRAYADQLGIIPGSQG
TASYIVQGRGEPESFMSCSHGAGRRMGRKQAQKELDLAAEKERLDAIGVIHGIRNTKDLD
EAPGAYKDISQVMGNQKDLVDIQVELRPLAVIKG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagttatcagcaccgaaaacaagcctatcaagctctggctcgacgatctcgaa
gtcggagcccttgagcaggcaaagcatctcgccaatctcccttttgcctttcgtcatatc
gccctcatgccggacgcgcatcagggctacggtatgcccataggcggggtgttggctaca
gagggcgtggtgattcctaatgctgtcggtgttgatatcggctgcggaatgtgtgccgtg
caaacctctgtgcaggagatcaagcaggatgccctgaaaaagatcatgggcgatgttcgc
aagaggataccggtcggattcaagcatcataaaaaggcccaggacgaatccttcatgccc
gatagttcctcgggctgtcttgacgaattgaaaattgttcgcggtgaatatcgttccgca
ctcaagcaattgggaactttgggaggaggcaatcatttccttgaaatccagcaggggagc
gacggctttgtctggctgatgattcattcagggagccgtaatctcggctataaggtggct
catcattataataaaatggccattgcgttgaaccgaaaatggcatacctcggtgccggaa
aaatggcagctagcttttcttcctctcgacggtcggaaagggcaggattatctccgggag
atgcaatactgcgttgatttcgccttggccaacaggcggctgatgatgcaacggatgcag
gagacctttgccgaggtggtcggtgatgtggttggcgatgtccgctttgaggaaatgatc
aacatcgcccataattatgcggcaatggagcatcattttaaaaaggatgtgatgatccac
cgcaagggcgcgaccagggcctatgctgaccagctgggaattattcccggcagccaaggg
acagcgagctatattgtgcagggcaggggagagccggaaagctttatgtcctgctcacac
ggggccgggcgcaggatgggacggaagcaggcccagaaggaacttgatcttgctgcggaa
aaagagcggcttgatgccatcggggtgatccacgggatacggaatacaaaggatcttgat
gaggcaccgggtgcctataaggatatctctcaggttatgggtaaccagaaggatcttgtt
gatattcaggttgaattgcggcctctggcggtgataaaagggtag
DBGET
integrated database retrieval system
