Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_0719
Help
Entry
ECRM13514_0719 CDS
T03010
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecoo03400
]
ECRM13514_0719 (phrB)
Enzymes [BR:
ecoo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ECRM13514_0719 (phrB)
DNA repair and recombination proteins [BR:
ecoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ECRM13514_0719 (phrB)
Prokaryotic type
ECRM13514_0719 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AHG07412
LinkDB
All DBs
Position
762483..763901
Genome browser
AA seq
472 aa
AA seq
DB search
MTTHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWAAHNMSPRQAELINAQLN
GLQIALAEKGIPLLFREVDDFAASVEIIKQVCAENSVTHLFYNYQYEVNERARDVEVERA
LRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSSGS
IDPAPPITLNYPRQSFDTAHFPVEEKAAIAQLRLFCQNGAWQYEQQRDFPAVEGTSRLSA
SLATGGLSPRQCLYRLLAEQPQALEGGPGSVWLNELIWREFYRHLMTYYPSLCKHRPFIA
WTDRVQWQRNPAHFKAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDW
REGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDREGEFIRQWL
PELRNVPGKSVHEPWKWAQKAGVKLDYPQPIVEHKEARVQTLAAYEAARKGK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgactacccatctggtctggtttcgccaggatttacgtctgcatgataatctcgcgctg
gctgccgcctgccgcaattcatctgcacgcgtgctggcgttgtatatcgctacaccacgc
cagtgggcggcgcataatatgtcgccgcgtcaggctgaacttatcaatgctcaactgaac
gggctacaaatcgcgctggcggaaaaaggtattcctttattgttccgtgaagtggatgac
tttgccgccagcgtcgaaataattaaacaggtgtgcgcggaaaacagcgttactcatctt
ttttataactatcagtatgaggtgaatgagcgggcgcgggatgtggaagttgaaagagcg
ctgcgtaacgtggtgtgtgaaggatttgatgacagcgtgatcctgccgcctggcgcggtg
atgaccggcaatcatgagatgtacaaagtctttacgccttttaagaatgcctggctgaaa
cggctgcgggaagggatgccggagtgcgtcgccgcgccaaaagttcgtagcagcggatcg
atagatcccgctccacctattacgctgaattatcctcgtcagtctttcgacactgcacat
ttcccggtggaagaaaaagcggcgattgcgcaattacgccttttttgccagaacggtgcc
tggcagtacgagcaacagcgtgatttcccggcggtagaaggcaccagccgtttatctgcc
agcctggcaacgggcggcttatcgcctcgccagtgtttgtatcgcctgttggcggaacaa
ccgcaggcgctggaaggcggaccgggtagcgtctggcttaatgagctgatatggcgcgag
ttctaccgccatttgatgacgtattatccttcgctgtgtaaacaccgcccgtttattgcc
tggacggatcgtgtgcagtggcagcgcaatcccgcccattttaaagcctggcaggaagga
aaaacgggatacccgattgttgatgcagctatgcgtcagcttaacagcactggctggatg
cataacaggctacggatgattacagccagttttctggtgaaagatttgttgatcgactgg
cgcgaaggcgagcgatatttcatgtcgcagctgattgatggtgatttggcagccaataac
ggtggctggcagtgggcggcttctacgggtactgatgcagcgccgtattttcgtattttc
aacccgacaacccagggcgagaaatttgaccgcgaaggcgagtttatccgccagtggcta
ccggaactacgcaatgtaccggggaaatcggtgcatgagccgtggaagtgggcgcagaaa
gcaggtgtgaagctggattatccgcaaccgatagtcgagcacaaagaggcgagagtacaa
acgttggcagcgtatgaggcggcgcggaaggggaaataa
DBGET
integrated database retrieval system
