Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_0912
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Entry
ECRM13514_0912 CDS
T03010
Symbol
rimO
Name
(GenBank) Ribosomal protein S12p Asp88 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecoo03009
]
ECRM13514_0912 (rimO)
Enzymes [BR:
ecoo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ECRM13514_0912 (rimO)
Ribosome biogenesis [BR:
ecoo03009
]
Prokaryotic type
ribosomal protein modification factors
ECRM13514_0912 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AHG07599
LinkDB
All DBs
Position
complement(945707..947032)
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AA seq
441 aa
AA seq
DB search
MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV
QESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR
LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL
RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW
NRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKP
GDILRVKVEHADEYDLWGSRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtaactccccagccgaaaatcggctttgtttcccttggctgtccgaaaaac
cttgttgattcagagcgtattctcaccgaactacgcactgaaggttatgacgtggtaccg
agctatgacgatgcggacatggtgatagtcaacacctgcggctttattgacagcgcggta
caagaatcactggaagccattggtgaagcgttgaatgaaaacggcaaggtaattgtgacc
ggttgtctgggggcaaaagaagatcagatccgcgaagtccacccgaaagtgctggaaatc
accgggcctcatagctatgagcaggttctggagcacgttcatcactacgtgccaaaaccg
aaacacaacccattcctgagcctggtgccagaacaaggtgtcaaactgacgccgcgtcat
tatgcctatctgaaaatttctgaaggctgtaatcaccgctgcaccttctgcattattccg
tctatgcgcggcgacctggtgagccgtccgattggcgaagtgttaagtgaagcgaaacgt
ctggtagatgcgggcgttaaagagattctggtgatctcgcaggatacttccgcctatggc
gttgatgttaaacatcgtactggcttccacaacggcgagccggtaaaaaccagcatggtc
agcctgtgcgaacagttatcgaaactggggatctggacacgtctgcactatgtttatcct
tatccgcatgtggacgacgtcatcccactgatggcggaaggcaaaatcctgccgtatctg
gacattccgttgcagcacgccagcccgcgcattctcaaactgatgaagcgtccgggttct
gtagatcgccaactggcgcgcatcaaacagtggcgcgaaatctgcccggaactgacccta
cgctcaacctttattgtcggcttccctggcgagacggaagaagatttccagatgctactc
gacttcctgaaagaagcgcgtctggatcgcgttggctgctttaaatacagcccggttgaa
ggtgcagacgccaatgccctgcctgaccaggttccggaagaagtgaaagaagaacgctgg
aaccgtttcatgcagctgcagcagcagatttccgccgagcgcctgcaagagaaagtgggc
cgtgaaattctggtgattatcgacgaagtggacgaagaaggcgcgattggtcgcagcatg
gcagatgcaccggaaatcgacggtgcggtttatctcaatggtgaaaccaacgttaagccg
ggtgatatcctgcgtgtgaaagtcgagcacgccgatgagtacgatttgtggggtagccgg
gtttaa
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